XGA v0.5.2 - Bug fix

What's Changed

• Fixed mass convenience function so that it defines the hydrostatic ma… by @DavidT3 in #1296

Full Changelog: v0.5.1...v0.5.2

XGA v0.5.1 - Revamp of entropy & mass profiles, and new thermal pressure profile

Summary

Quite a few general bug fixes, but the most important changes are to how the mass and entropy profiles work, and the introduction of a new thermal pressure profile.

Mass, entropy, and pressure profiles are no longer restricted to taking smooth models of temperature and density as their input - instead they can take data points, and interpolate between them in cases where the radial bins aren't the same. They can still use smooth models as inputs.

As a consequence of this, models for entropy, mass, and pressure have been added - these can be fit to those profiles, as they can now be purely data driven.

What's Changed

• Allow the user to set the clean_obs_threshold for XGA-LTR runs. by @DavidT3 in #1204
• Bug/another ltr index bug by @DavidT3 in #1206
• Bug/cbar scaling relation by @DavidT3 in #1208
• Feat/one to one scaling relation view by @DavidT3 in #1211
• Think that the annoying warning should be vanquished - for issue #1220 by @DavidT3 in #1221
• Refine/gal clust exclude bright points by @DavidT3 in #1223
• Added the ASCL badge to XGA README by @DavidT3 in #1225
• Hopefully fixed the declaration of matplotlib slider instances in the… by @DavidT3 in #1229
• Fixing a mistake in type checking in ClusterSample by @DavidT3 in #1247
• Fixed another mistake in the ClusterSample init related to the core p… by @DavidT3 in #1248
• Refine/revamp hydro mass profile product by @DavidT3 in #1275
• Feat/pressure profile class by @DavidT3 in #1278
• Added the entropy, mass, and pressure sections to the xga.models API … by @DavidT3 in #1287

Full Changelog: v0.5.0...v0.5.1

XGA v0.5.0 - HUGE DEPENDENCY UPDATE

Important Summary

Some bug fixes, some refinements to existing behaviour.

A pretty big new feature is that the SpecificEntropy profile class no longer behaves exactly like the HydrostaticMass profile class - in that it no longer requires you to calculate the entropy profile from fitted models to temperature and density, you can now use data points to calculate entropy as well, which is preferable. There are also models that can be fit to SpecificEntropy profiles, and you can use projected temperature profiles to calculate entropy if you wish.

The other new feature worthy of note is the addition of 'data driven' density profile calculation for galaxy clusters from surface brightness profiles. In addition to the existing 'inv_abel_fitted_model', which requires that a smooth model be fit to the surface brightness and then deprojected, you can now apply deprojection (inverse abel transforms) directly to data points - this can preserve interesting structure in the brightness profiles.

However, the biggest change is that we have finally updated all of the dependencies, and you will need to create a new environment to use this version of XGA. This was neglected for some years and it was becoming difficult to actually install XGA - that should now no longer be a problem, and if you visit the documentation site you will see instructions on how to use the newly included conda files to easily setup a compatible environment. We also aim for this to be the first release of XGA to be distributed through conda.

What's Changed

• Added SDSSRM Giles et al. core-excised scaling relations by @DavidT3 in #1148
• Bug/inst not associated on spec fit by @DavidT3 in #1152
• Refine/nuke dependencies by @DavidT3 in #1166
• Feat/data driven entropy by @DavidT3 in #1170
• Feat/fit entropy profiles by @DavidT3 in #1175
• Bug/unknown fitsio cannot open none by @DavidT3 in #1180
• Feat/data driven density by @DavidT3 in #1182
• Dep bug/matplotlib version was yanked by @DavidT3 in #1183
• Bug/direct model inv abel trans warnings by @DavidT3 in #1184
• Made the mass model derivation print out LaTeX code, for the benefit … by @DavidT3 in #1185
• There was a bug in how the specific entropy profiles check for cases … by @DavidT3 in #1187
• Bug/scaling relation scalar prediction by @DavidT3 in #1191
• Update .gitattributes by @DavidT3 in #1192
• Update conda_env_notes.md by @DavidT3 in #1194
• Updating some action versions in the publishing actions, as well as t… by @DavidT3 in #1195
• Switched the gh-action pypi publish version to v1 rather than master by @DavidT3 in #1196
• Refine/catch region error and add more context by @DavidT3 in #1199
• Update setup.cfg by @DavidT3 in #1200
• Vers/test versioneer by @DavidT3 in #1202
• Vers/test versioneer by @DavidT3 in #1203

Full Changelog: v0.4.5...v0.5.0

XGA v0.4.5 - Tiny patch

What's Changed

• Hopefully will catch incomplete annular spectra being read in - with … by @DavidT3 in #1146

Full Changelog: v0.4.4...v0.4.5

v0.4.4

What's Changed

• Bug/ann spec none no usable take two by @DavidT3 in #1119
• Feat/limit value range image view by @DavidT3 in #1120
• Added the ability to set a custom title in the view method of image by @DavidT3 in #1122
• Refine/make relation error propagation work by @DavidT3 in #1126
• Think I should have fixed the bug where relation plots get angry with… by @DavidT3 in #1127
• y offset in point labelling should now work properly by @DavidT3 in #1128
• Refine/update giles lt relations by @DavidT3 in #1129
• Added XCS SDSSRM R2500 scaling relations for LT by @DavidT3 in #1133
• Bug/interactive region altering not working by @DavidT3 in #1134
• Refine/more informative non sas error messages by @DavidT3 in #1139

Full Changelog: v0.4.3...v0.4.4

XGA v0.4.3 release

Bug fixes for LightCurves and new features for the XGA Luminosity, Temperature, Radius pipeline

A new 'frozen-temperature' mode is included for the XGA-LTR, very strongly based on the XCS implementation in Giles et al. 2022 - meant for low surface brightness clusters that don't necessarily have the photons to constrain temperature and luminosity simultaneously through spectral fitting.

What's Changed

• Update requirements.txt by @DavidT3 in #1063
• Feat/light curve sas generation by @DavidT3 in #1072
• Changed the default value of 'pattern' for the get methods for lightc… by @DavidT3 in #1074
• Should have fixed the unpacking error that showed up in on_xmm_match by @DavidT3 in #1075
• Hopefully fixed the possible bug where reading in lightcurves will fa… by @DavidT3 in #1077
• Added a 'freeze_temp' argument to single_temp_apec, though it doesn't… by @DavidT3 in #1078
• Refine/fix fixed tx lx pipeline by @DavidT3 in #1081
• Should have fixed the bug where the aggregate profile view method wit… by @DavidT3 in #1083
• Bug/disass error when loading back in after lc gen by @DavidT3 in #1087

Full Changelog: v0.4.2...v0.4.3

XGA v0.4.2 release (no v0.4.0 release)

This release accompanies the first XCS hydrostatic mass measurement paper, for a sample selected from SDSS redMaPPer. A great deal of time has passed since the last release, and many bugs have been fixed and changes made. The automatic release notes are included below, but two standout new features are the first XGA pipeline (to iteratively measure luminosities, temperatures, and radii using scaling relations), and the interactive region editor.

What's Changed

• Bug/single obs interloper masks by @DavidT3 in #770
• Docs/add paper ref by @DavidT3 in #773
• Added the ability to draw annuli on an Image view when two coordinate… by @DavidT3 in #778
• I think I have solved the problem of spectra being regenerated repeat… by @DavidT3 in #790
• Feat/matching multi and more intelligent by @DavidT3 in #795
• Feat/double king profile by @DavidT3 in #812
• Feat/temp prof spec fit options by @DavidT3 in #813
• Feat/core excised masses by @DavidT3 in #815
• Feat/manually modify regions by @DavidT3 in #820
• Feat/manually modify regions by @DavidT3 in #830
• Altered the way that Census building works in utils so that there is … by @DavidT3 in #831
• Refine/better blacklist by @DavidT3 in #833
• Feat/measure overdensity radii by @DavidT3 in #839
• Feat/new ann method and mass models by @DavidT3 in #847
• Bug/overdensity rad bracket failure by @DavidT3 in #856
• Bug+refine/scaling relation issues by @DavidT3 in #866
• Feat/mass profile diagnostics by @DavidT3 in #875
• Bug/temp profile radii wrong by @DavidT3 in #882
• Bug/gas mass unit bug by @DavidT3 in #915
• Bodge/gas mass radii error by @DavidT3 in #916
• Feat/separate region matching function by @DavidT3 in #929
• Bug/pandas frame append deprecated by @DavidT3 in #933
• Refine/one warning per sample by @DavidT3 in #938
• Bug/warning when in sample by @DavidT3 in #941
• Bug/ampersand end of spec resp headers by @DavidT3 in #942
• Bug/wcs required for regions by @DavidT3 in #950
• Feat/first xga tool lt pipeline by @DavidT3 in #965
• Feat/add entropy profile by @DavidT3 in #969
• Added the entropy sourcetools submodule into the sourcetools.rst file… by @DavidT3 in #973
• Refine/resilient spec gen lt by @DavidT3 in #975
• I think I way overcomplicated how the LT worked if spectral generatio… by @DavidT3 in #979
• Bug/uncaught sas error ltr pipeline by @DavidT3 in #985
• Refine/add relation diagnostic view by @DavidT3 in #986
• Turned off autosave in the general XSPEC template. Should close issue… by @DavidT3 in #988
• The LTR pipeline should now save the peak coordinates into the result… by @DavidT3 in #990
• Bug/fix r2500 only cluster def by @DavidT3 in #996
• Feat/multi temp plasma by @DavidT3 in #1000
• Bug/annspec none no attribute usable by @DavidT3 in #1003
• Refine/view spectra properly by @DavidT3 in #1006
• Refine/read the docs conf by @DavidT3 in #1008
• Deleted the old spectrum view method, and renamed new_view to view (a… by @DavidT3 in #1009
• Feat/cross arf generation and storage by @DavidT3 in #1012
• Feat/met free ltr by @DavidT3 in #1035
• Hopefully have fixed issue #1028, I was appending a length of an arra… by @DavidT3 in #1036
• Refine/plotting improvements by @DavidT3 in #1041
• Removed the raise warn for issue #1042 - also improved the warning me… by @DavidT3 in #1043
• Hopefully improved the calculation of uncertainties for the deproject… by @DavidT3 in #1044
• Refine/control ltr spec energy bounds by @DavidT3 in #1045
• Added the ability to control spectral binning to the LTR by @DavidT3 in #1046
• I missed adding the grouping information to the temperature, luminosi… by @DavidT3 in #1047
• Fixed a bug where wdem was checking if kT existed if there had been a… by @DavidT3 in #1051
• Bug/publish workflow os version by @DavidT3 in #1055
• Bug/requirements before release by @DavidT3 in #1056

Full Changelog: v0.3.0...v0.4.2

The release of XGA v0.3.0 - accompanying the arXiv release of the paper

Merge pull request #769 from DavidT3/docs/readyForRelease

Docs/ready for release

Updates to PointSample and point source matching

Another incremental release with some bug fixes, this is the version I used for C.J. Burke et al. DES AGN paper.

Small masking bug fix

This corrects a breaking bug that was present in version 0.2.1, where masks generated by RateMap objects to remove chip edges were just integer values. This caused anything to do with generating brightness profiles to just not run.