make LCA signatures() method return signatures with the correct original name #917
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In 2020-cami I built an LCA index out of an SBT index (relevant snakemake rules). While writing a script for extracting accessions from an index (in https://github.com/dib-lab/2019-12-12-sourmash_viz) I noticed that the
.signatures
method for LCA is not returning the original name from the signature, but the md5sum.So, how does
gather
return the correct name? 🤔Turns out that the logic for picking the right name is in
find_signatures
, so I just moved it to_signatures
instead (and made_signatures
storeSignature
s instead ofMinHash
s). Now signatures from the.signatures
method have the original signature name.Checklist
make test
Did it pass the tests?make coverage
Is the new code covered?without a major version increment. Changing file formats also requires a
major version number increment.
changes were made?