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[pull] develop from IQSS:develop #640

Merged
merged 2,612 commits into from
Jun 30, 2024
Merged

[pull] develop from IQSS:develop #640

merged 2,612 commits into from
Jun 30, 2024

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@pull pull bot commented Sep 22, 2023

See Commits and Changes for more details.


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coveralls commented Sep 22, 2023

Pull Request Test Coverage Report for Build #645

Warning: This coverage report may be inaccurate.

This pull request's base commit is no longer the HEAD commit of its target branch. This means it includes changes from outside the original pull request, including, potentially, unrelated coverage changes.

Details

  • 1068 of 6186 (17.26%) changed or added relevant lines in 226 files are covered.
  • 155 unchanged lines in 69 files lost coverage.
  • Overall coverage increased (+0.6%) to 20.659%

Changes Missing Coverage Covered Lines Changed/Added Lines %
src/main/java/edu/harvard/iq/dataverse/DatasetField.java 0 1 0.0%
src/main/java/edu/harvard/iq/dataverse/NavigationWrapper.java 0 1 0.0%
src/main/java/edu/harvard/iq/dataverse/RoleAssigneeServiceBean.java 0 1 0.0%
src/main/java/edu/harvard/iq/dataverse/SendFeedbackDialog.java 0 1 0.0%
src/main/java/edu/harvard/iq/dataverse/TemplatePage.java 0 1 0.0%
src/main/java/edu/harvard/iq/dataverse/api/Prov.java 0 1 0.0%
src/main/java/edu/harvard/iq/dataverse/api/TestIngest.java 0 1 0.0%
src/main/java/edu/harvard/iq/dataverse/api/datadeposit/CollectionListManagerImpl.java 0 1 0.0%
src/main/java/edu/harvard/iq/dataverse/authorization/UserRecordIdentifier.java 4 5 80.0%
src/main/java/edu/harvard/iq/dataverse/authorization/providers/shib/ShibUtil.java 0 1 0.0%
Files with Coverage Reduction New Missed Lines %
src/main/java/edu/harvard/iq/dataverse/engine/command/impl/ImportDatasetCommand.java 1 0.0%
src/main/java/edu/harvard/iq/dataverse/util/bagit/BagGenerator.java 1 0.0%
src/main/java/edu/harvard/iq/dataverse/engine/command/impl/PublishDatasetCommand.java 1 0.0%
src/main/java/edu/harvard/iq/dataverse/DatasetField.java 1 54.79%
src/main/java/edu/harvard/iq/dataverse/settings/SettingsServiceBean.java 1 51.3%
src/main/java/edu/harvard/iq/dataverse/api/Admin.java 1 0.0%
src/main/java/edu/harvard/iq/dataverse/ingest/IngestServiceBean.java 1 4.71%
src/main/java/edu/harvard/iq/dataverse/workflows/WorkflowUtil.java 1 0.0%
src/main/java/edu/harvard/iq/dataverse/FilePage.java 1 0.0%
src/main/java/edu/harvard/iq/dataverse/engine/command/impl/GetSpecificPublishedDatasetVersionCommand.java 1 0.0%
Totals Coverage Status
Change from base Build #570: 0.6%
Covered Lines: 17074
Relevant Lines: 82647

💛 - Coveralls

@pull pull bot added the ⤵️ pull label Sep 22, 2023
pdurbin and others added 28 commits April 12, 2024 16:49
…-tests

Fix intermittent IT test failures for HarvestingClientsIT
- Create a common cache to draw from when no branch caches exist
- Rejuvenate the common cache to ensure it's around using pushes,
  schedule or manual runs
- To save space, we automatically trigger a job on a closed PR to delete
  any caches for the feature branch just merged
bump solrj per qqmyers to address zookeeper dependency @qqmyers @donsizemore 😄
Added postgresql-client to the list of installed apk packages
No longer necessary, as all necessary add-opens were added with 6.2023.10
With 6.2023.7 they removed fish.payara.api:payara-api from the BOM, only to reintroduce it with 6.2023.12.

We can simply revert adding the version and rely on Maven to get the version from the Payara BOM.
We should avoid hardcoding the version into the link to avoid stale information.
No longer necessary as the required add-opens has been included in upstream
"Deplete" seems harder to understand than just plain ol' "delete".

Co-authored-by: Philip Durbin <philip_durbin@harvard.edu>
Enable Maven cache management for Github Actions
JQ has moved, both RPM repo and GH source
…lose-fileinputstream-gzippedin

10052 use try with resources to close fileinputstream gzippedin


Conflicts:
src/main/java/edu/harvard/iq/dataverse/settings/JvmSettings.java
add verbiage about releasing research and scholarship attribute set
qqmyers and others added 29 commits June 25, 2024 11:53
* #10581 fix subject line of request access email

* #10581 add sorter

* #10581 addl user info for request email

* #10581 add break between custom Q responses

* #10581 remove orderby
…l - it appears that it may have been missed in the original #10464 (? - will confirm). #10611
…nge_solr_doc_deletes

Solr: don't delete docs that will just change
…S/10559-2-drop_commit_within

IQSS/10559-2 Drop COMMIT_WITHIN which breaks autoSoftCommit by maxTime in solrconfig
Resolved merged conflicts in config.rst and FeatureFlags.java #10611
Fixes an issue with search cards for harvested records
Support additional Exporter MIME Types
…S/10656-filemanager_emails

IQSS/10656-fix permission check for request access notifications/emails
…S/10557-fix_installer_fake_pid_setup

IQSS/10557-fix-installer-pid-setup
* drop COMMIT_WITHIN which breaks autoSoftCommit by maxTime in solrconfig

* add disable-return-to-author-reason feature flag

* release note, doc updates

* missed use
…odifyRegistration_API_calls_to_only_update_when_necessary

IQSS-5505 - only update DOI metadata at PIDprovider when it changes
@pull pull bot merged commit 2917dbe into poikilotherm:develop Jun 30, 2024
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