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add setup-r #295

Merged
merged 8 commits into from
Jan 15, 2025
Merged

add setup-r #295

merged 8 commits into from
Jan 15, 2025

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sbidari
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@sbidari sbidari commented Jan 14, 2025

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@sbidari sbidari linked an issue Jan 14, 2025 that may be closed by this pull request
Add setup R step in precommit workflow #294
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codecov bot commented Jan 14, 2025 •
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Codecov Report

All modified and coverable lines are covered by tests ✅

Project coverage is 15.87%. Comparing base (1c2e2cc) to head (98fb748).
Report is 1 commits behind head on main.

Additional details and impacted files 
@@           Coverage Diff           @@
##             main     #295   +/-   ##
=======================================
  Coverage   15.87%   15.87%           
=======================================
  Files          21       21           
  Lines        1537     1537           
=======================================
  Hits          244      244           
  Misses       1293     1293
Flag Coverage Δ
hewr 47.68% <ø> (ø)
pipelines 0.00% <ø> (ø)
pyrenew_hew 1.65% <ø> (ø)

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@sbidari sbidari marked this pull request as ready for review January 14, 2025 20:34
dylanhmorris
dylanhmorris approved these changes Jan 14, 2025
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LGTM, provided CI checks pass. Thanks, @sbidari!

@dylanhmorris dylanhmorris enabled auto-merge (squash) January 14, 2025 20:38
@dylanhmorris dylanhmorris disabled auto-merge January 15, 2025 20:29
@dylanhmorris dylanhmorris merged commit a70e296 into main Jan 15, 2025
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@dylanhmorris dylanhmorris deleted the 294-add-setup-r-step-in-precommit-workflow branch January 15, 2025 20:29
This was referenced Jan 15, 2025
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damonbayer added a commit that referenced this pull request Jan 22, 2025
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Squashed commit of the following:
75774d6 
commit 724d09b
Author: Dylan H. Morris <dylanhmorris@users.noreply.github.com>
Date:   Sat Jan 18 17:31:57 2025 +0000

    Add helper data `PyrenewHEWData` class to hold input data to `PyrenewHewModel`s (#283)

commit bc76d59
Author: Subekshya Bidari <37636707+sbidari@users.noreply.github.com>
Date:   Fri Jan 17 14:18:11 2025 -0500

    add subpopulation to LatentInfectionProcess (#282)

commit a70e296
Author: Subekshya Bidari <37636707+sbidari@users.noreply.github.com>
Date:   Wed Jan 15 15:29:44 2025 -0500

    add setup-r (#295)
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@dylanhmorris dylanhmorris dylanhmorris approved these changes

@damonbayer damonbayer Awaiting requested review from damonbayer damonbayer is a code owner

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Add setup R step in precommit workflow
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@sbidari @dylanhmorris