Deploying 2021.05 data.kidsfirstdrc.org 1623353263

[PlanXCyborg]

Applying version 2021.05 to data.kidsfirstdrc.org

[PlanXCyborg]

data.kidsfirstdrc.org/manifest.json

Deployment changes

• fence
  • Audit logs for user logins and data downloads can be enabled by deploying the audit-service and adding setting ENABLE_AUDIT_LOGS to the fence config (see https://github.com/uc-cdis/fence/blob/1c850d07e54f8527dbde182fdd9dd593d18f660e/fence/config-default.yaml#L586-L588) (uc-cdis/PXP-7447 audit-service integration fence#885)
  • REQUIRES A FENCE DB MIGRATION, since with this update there is now an additional column in the authorization_code table "refresh_token_expires_in" (uc-cdis/Feat/refresh expires in fence#848)
• portal
  • envs with customized color schemes no longer need to overwrite dictionary button color in their gitops.css (uc-cdis/(PXP-6570): refactor/dictionaryBtnColor: change dictionary btn to use defined global colors data-portal#822)
  • New optional config property, tierAccessLevel, in each tab of the explorerConfig block in the portal config. Used to enable index-scoped tiered-access, which is only available starting with Guppy server version 0.11.0. See README for more information. (uc-cdis/Feat/index scoped tiered access data-portal#802)
  • To deploy Discovery page: (uc-cdis/(PXP-7402) Discovery page data-portal#803)
  • "featureFlags": { "discovery": true } must be set in the portal config. (uc-cdis/(PXP-7402) Discovery page data-portal#803)
  • If discoveryConfig.features.authorization.enabled: true, "useArboristUI": true must be set in the portal config. (uc-cdis/(PXP-7402) Discovery page data-portal#803)
  • "discoveryConfig": <DiscoveryConfig> must be set in the portal config. DiscoveryConfig documentation can be found at https://github.com/uc-cdis/data-portal/blob/master/docs/portal_config.md (uc-cdis/(PXP-7402) Discovery page data-portal#803)
  • To upload data to Discovery page, data must be uploaded to environment's metadata-service instance with guid_type: "discovery_metadata". The metadata must all be under the top-level property gen3_discovery. (No documentation on this process yet, see this gist for right now https://gist.github.com/Avantol13/a53593837503fede2881f315198247c4) (uc-cdis/(PXP-7402) Discovery page data-portal#803)
  • Added new entry GWASApp for analysisTools for this new GWAS app for VA. Beaware not to confuse with the old "GWAS PoC" app, which bears the entry vaGWAS (uc-cdis/PXP-7296 PXP-7180 Feat/va gwas app data-portal#777)
  • antd modal now by default will use g3-color__base-blue as header background color, this is consistant with our color schemes for other UI components. If an env has customized color scheme, please override .ant-modal-header in gitops.css (uc-cdis/PXP-7296 PXP-7180 Feat/va gwas app data-portal#777)
  • The new feature of Portal requires Guppy v0.10.0 (uc-cdis/(PXP-6540): Feat/explorer download formats data-portal#780)
  • Added new button types in the Portal config. See portal_config.md for an example. (uc-cdis/(PXP-6540): Feat/explorer download formats data-portal#780)

[PlanXCyborg]

data.kidsfirstdrc.org/manifest.json

Deployment changes

• fence
  • Audit logs for user logins and data downloads can be enabled by deploying the audit-service and adding setting ENABLE_AUDIT_LOGS to the fence config (see https://github.com/uc-cdis/fence/blob/1c850d07e54f8527dbde182fdd9dd593d18f660e/fence/config-default.yaml#L586-L588) (uc-cdis/PXP-7447 audit-service integration fence#885)
  • REQUIRES A FENCE DB MIGRATION, since with this update there is now an additional column in the authorization_code table "refresh_token_expires_in" (uc-cdis/Feat/refresh expires in fence#848)
• portal
  • envs with customized color schemes no longer need to overwrite dictionary button color in their gitops.css (uc-cdis/(PXP-6570): refactor/dictionaryBtnColor: change dictionary btn to use defined global colors data-portal#822)
  • New optional config property, tierAccessLevel, in each tab of the explorerConfig block in the portal config. Used to enable index-scoped tiered-access, which is only available starting with Guppy server version 0.11.0. See README for more information. (uc-cdis/Feat/index scoped tiered access data-portal#802)
  • To deploy Discovery page: (uc-cdis/(PXP-7402) Discovery page data-portal#803)
  • "featureFlags": { "discovery": true } must be set in the portal config. (uc-cdis/(PXP-7402) Discovery page data-portal#803)
  • If discoveryConfig.features.authorization.enabled: true, "useArboristUI": true must be set in the portal config. (uc-cdis/(PXP-7402) Discovery page data-portal#803)
  • "discoveryConfig": <DiscoveryConfig> must be set in the portal config. DiscoveryConfig documentation can be found at https://github.com/uc-cdis/data-portal/blob/master/docs/portal_config.md (uc-cdis/(PXP-7402) Discovery page data-portal#803)
  • To upload data to Discovery page, data must be uploaded to environment's metadata-service instance with guid_type: "discovery_metadata". The metadata must all be under the top-level property gen3_discovery. (No documentation on this process yet, see this gist for right now https://gist.github.com/Avantol13/a53593837503fede2881f315198247c4) (uc-cdis/(PXP-7402) Discovery page data-portal#803)
  • Added new entry GWASApp for analysisTools for this new GWAS app for VA. Beaware not to confuse with the old "GWAS PoC" app, which bears the entry vaGWAS (uc-cdis/PXP-7296 PXP-7180 Feat/va gwas app data-portal#777)
  • antd modal now by default will use g3-color__base-blue as header background color, this is consistant with our color schemes for other UI components. If an env has customized color scheme, please override .ant-modal-header in gitops.css (uc-cdis/PXP-7296 PXP-7180 Feat/va gwas app data-portal#777)
  • The new feature of Portal requires Guppy v0.10.0 (uc-cdis/(PXP-6540): Feat/explorer download formats data-portal#780)
  • Added new button types in the Portal config. See portal_config.md for an example. (uc-cdis/(PXP-6540): Feat/explorer download formats data-portal#780)

[paulineribeyre]

will deploy 2021.06 instead