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[TheiaProk] Add additional input enabling characterization #547

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merged 4 commits into from
Jul 24, 2024
Merged

[TheiaProk] Add additional input enabling characterization #547

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0f31c49
optionalize characterization with new boolean input
sage-wright Jul 17, 2024
8d4581d
move gambit into characterization boolean
sage-wright Jul 17, 2024
db2d9bc
make gambit outputs optional and fix typo
sage-wright Jul 17, 2024
3bc6577
update md5sums
sage-wright Jul 17, 2024
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2 changes: 1 addition & 1 deletion tests/workflows/theiaprok/test_wf_theiaprok_illumina_pe.yml
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Original file line number Diff line number Diff line change
Expand Up @@ -633,7 +633,7 @@
- path: miniwdl_run/wdl/tasks/utilities/data_export/task_broad_terra_tools.wdl
md5sum: 14565031f96d01ee6480bb0f9d19551d
- path: miniwdl_run/wdl/workflows/theiaprok/wf_theiaprok_illumina_pe.wdl
md5sum: 646e726beb68fc61f84a428bf2fb7244
md5sum: 6d9dd969e2144ca23f2a0e101e6b6966
- path: miniwdl_run/wdl/workflows/utilities/wf_merlin_magic.wdl
md5sum: 43367523b9140ca0d2ac15869046343c
- path: miniwdl_run/wdl/workflows/utilities/wf_read_QC_trim_pe.wdl
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2 changes: 1 addition & 1 deletion tests/workflows/theiaprok/test_wf_theiaprok_illumina_se.yml
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Original file line number Diff line number Diff line change
Expand Up @@ -596,7 +596,7 @@
- path: miniwdl_run/wdl/tasks/utilities/data_export/task_broad_terra_tools.wdl
md5sum: 14565031f96d01ee6480bb0f9d19551d
- path: miniwdl_run/wdl/workflows/theiaprok/wf_theiaprok_illumina_se.wdl
md5sum: 347c054f9850e885e6a130d1655765d7
md5sum: 5aa25e4fad466f92c96a7c138aca0d20
- path: miniwdl_run/wdl/workflows/utilities/wf_merlin_magic.wdl
md5sum: 43367523b9140ca0d2ac15869046343c
- path: miniwdl_run/wdl/workflows/utilities/wf_read_QC_trim_se.wdl
Expand Down
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