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Bump memmap2 from 0.5.8 to 0.5.9 #2486

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Feb 20, 2023
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@dependabot dependabot bot commented on behalf of github Feb 20, 2023

Bumps memmap2 from 0.5.8 to 0.5.9.

Changelog

Sourced from memmap2's changelog.

[0.5.9] - 2023-02-17

Added

  • From<Mmap> for MmapRaw and From<MmapMut> for MmapRaw. @​swlynch99
  • Mmap::advise_range, MmapMut::advise_range, MmapRaw::advise_range. @​ho-229
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@dependabot dependabot bot added dependencies Pull requests that update a dependency file rust labels Feb 20, 2023
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codecov bot commented Feb 20, 2023

Codecov Report

Merging #2486 (2388a8c) into latest (f1fbe3b) will decrease coverage by 0.07%.
The diff coverage is n/a.

@@            Coverage Diff             @@
##           latest    #2486      +/-   ##
==========================================
- Coverage   84.72%   84.65%   -0.07%     
==========================================
  Files         132      132              
  Lines       14731    14731              
  Branches     2503     2503              
==========================================
- Hits        12481    12471      -10     
- Misses       1948     1958      +10     
  Partials      302      302              
Flag Coverage Δ
python 92.44% <ø> (-0.09%) ⬇️
rust 51.39% <ø> (ø)

Flags with carried forward coverage won't be shown. Click here to find out more.

Impacted Files Coverage Δ
src/sourmash/sbt_storage.py 85.81% <0.00%> (-3.38%) ⬇️

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ctb commented Feb 20, 2023

@dependabot rebase

@ctb ctb enabled auto-merge (squash) February 20, 2023 21:20
Bumps [memmap2](https://github.com/RazrFalcon/memmap2-rs) from 0.5.8 to 0.5.9.
- [Release notes](https://github.com/RazrFalcon/memmap2-rs/releases)
- [Changelog](https://github.com/RazrFalcon/memmap2-rs/blob/master/CHANGELOG.md)
- [Commits](RazrFalcon/memmap2-rs@v0.5.8...v0.5.9)

---
updated-dependencies:
- dependency-name: memmap2
  dependency-type: direct:production
  update-type: version-update:semver-patch
...

Signed-off-by: dependabot[bot] <support@github.com>
@dependabot dependabot bot force-pushed the dependabot/cargo/memmap2-0.5.9 branch from f7156b0 to 2388a8c Compare February 20, 2023 21:20
@ctb ctb merged commit be5fc32 into latest Feb 20, 2023
@ctb ctb deleted the dependabot/cargo/memmap2-0.5.9 branch February 20, 2023 22:21
@ctb ctb mentioned this pull request Mar 3, 2023
ctb added a commit that referenced this pull request Mar 3, 2023
# sourmash release 4.7.0

Major new features:

* provide an initial plugin architecture for sourmash that supports new
signature saving & loading mechanisms (#2428)
* add plugin support for new command-line subcommands (#2438)
* debias all containment values (#2243)

Minor new features:

* Use RankLineageInfo to simplify reading lineages (#2467)
* store taxids in lineageDB (#2466)
* Use new tax classes for taxonomic summarization (#2443)
* add tax summarization dataclasses for safety and flexibility (#2439)
* add `--scaled` to sourmash compare (#2414)
* replace `lca_utils.LineagePair` with `tax_utils.LineagePair` (#2441)
* Add new classes for lineage manipulation (#2437)

Cleanup and documentation updates:

* ReadTheDocs updates (#2445)
* update `sourmash compare` command-line docs (#2400)

Developer updates:

* fix python tests by bumping tox and pip cache versions (#2424)
* Update sphinx requirement from <6,>=4.4.0 to >=4.4.0,<7 (#2430)
* Build: replace milksnake with maturin (#2393)
* importlib_metadata is a dependency on old Python versions (#2484)
* Release docs: use two separate sed commands (#2483)
* minor fixes to release behavior (#2479)
* Use screed and maturin from nixpkgs in `flake.nix` (#2481)
* update release procedure after v4.6.0 and v4.6.1 (#2386)
* Update makefile and docs (#2432)

Dependabot updates:

* Bump once_cell from 1.17.0 to 1.17.1 (#2488)
* Bump ouroboros from 0.15.5 to 0.15.6 (#2487)
* Bump memmap2 from 0.5.8 to 0.5.9 (#2486)
* Bump supercharge/redis-github-action from 1.4.0 to 1.5.0 (#2485)
* Bump proptest from 1.0.0 to 1.1.0 (#2460)
* Bump web-sys from 0.3.60 to 0.3.61 (#2461)
* Bump serde_json from 1.0.91 to 1.0.93 (#2471)
* Bump wasm-bindgen-test from 0.3.33 to 0.3.34 (#2463)
* Bump cachix/install-nix-action from 18 to 19 (#2459)
* Bump wasm-bindgen from 0.2.83 to 0.2.84 (#2464)
* Bump typed-builder from 0.11.0 to 0.12.0 (#2451)
* Bump bumpalo from 3.9.1 to 3.12.0 (#2450)
* Bump pypa/cibuildwheel from 2.11.4 to 2.12.0 (#2447)
* Bump bzip2 from 0.4.3 to 0.4.4 (#2444)
* Bump once_cell from 1.14.0 to 1.17.0 (#2429)
* Bump serde from 1.0.151 to 1.0.152 (#2423)
* Bump pypa/cibuildwheel from 2.11.3 to 2.11.4 (#2422)
* Bump serde_json from 1.0.89 to 1.0.91 (#2418)
* Bump serde from 1.0.150 to 1.0.151 (#2419)
* Bump thiserror from 1.0.37 to 1.0.38 (#2417)
* Bump finch from 0.4.3 to 0.5.0 (#2416)
* Bump rayon from 1.6.0 to 1.6.1 (#2404)
* Bump serde from 1.0.149 to 1.0.150 (#2403)
* Bump pypa/cibuildwheel from 2.11.2 to 2.11.3 (#2402)
* Bump serde from 1.0.148 to 1.0.149 (#2397)
* Bump capnp from 0.14.5 to 0.14.11 (#2396)
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