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Fixes#2604
This PR fixes links to binder tutorials that apparently have been broken
since 2020 😱 , when the docs were switched over to myst-parser in
#1021.
To be fair, it's the kind of subtle bug that would leave users
scratching their head going "maybe it's me?" - the links simply went
back to the tutorial page... not sure why they weren't flagged by sphinx
or myst-parser as being bad!?
This PR also updates environment.yml to properly build:
* includes pip
* specifies minimum python version
* specifies minimum sourmash version
ref #2503 for why
specifying the minimum sourmash and/or python versions can be important!
And, finally, I ran and fixed all the notebooks...
Note: I confirmed that this branch launches properly in binder. The URL
is: https://mybinder.org/v2/gh/sourmash-bio/sourmash/fix/tutorial-nb
---------
Co-authored-by: ccbaumler <63077899+ccbaumler@users.noreply.github.com>
on https://sourmash.readthedocs.io/en/latest/tutorials.html#background-and-details, we have four tutorials:
The links to the first three are not working right: they are
the fourth one is correct, but ...it's not a notebook?
https://sourmash.readthedocs.io/en/latest/tutorial-lin-taxonomy.html
So to me it looks like the notebook plugin isn't working right.
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