[MRG] disable the fix_lint component of the py38 tests in tox.ini (…

…#1823)

* add --output-dir as alias for every --outdir

* remove fix_lint from py38 tox tests

src/sourmash/cli/compute.py

@@ -81,7 +81,8 @@ def subparser(subparsers):
         help='output computed signatures to this file'
     )
     file_args.add_argument(
-        '--outdir', help='output computed signatures to this directory'
+        '--outdir', '--output-dir',
+        help='output computed signatures to this directory',
     )
     file_args.add_argument(
         '--singleton', action='store_true',

src/sourmash/cli/sig/split.py

@@ -12,7 +12,8 @@ def subparser(subparsers):
         help='suppress non-error output'
     )
     subparser.add_argument(
-        '--outdir', help='output signatures to this directory'
+        '--outdir', '--output-dir',
+        help='output signatures to this directory',
     )
     subparser.add_argument(
         '-f', '--force', action='store_true',

src/sourmash/cli/sketch/dna.py

@@ -67,7 +67,8 @@ def subparser(subparsers):
         'specified name'
     )
     file_args.add_argument(
-        '--outdir', help='output computed signatures to this directory'
+        '--outdir', '--output-dir',
+        help='output computed signatures to this directory',
     )
     file_args.add_argument(
         '--singleton', action='store_true',

src/sourmash/cli/sketch/protein.py

@@ -67,7 +67,8 @@ def subparser(subparsers):
         'specified name'
     )
     file_args.add_argument(
-        '--outdir', help='output computed signatures to this directory'
+        '--outdir', '--output-dir',
+        help='output computed signatures to this directory',
     )
     file_args.add_argument(
         '--singleton', action='store_true',

src/sourmash/cli/sketch/translate.py

@@ -67,7 +67,8 @@ def subparser(subparsers):
         'specified name'
     )
     file_args.add_argument(
-        '--outdir', help='output computed signatures to this directory'
+        '--outdir', '--output-dir',
+        help='output computed signatures to this directory',
     )
     file_args.add_argument(
         '--singleton', action='store_true',

tox.ini

@@ -198,7 +198,7 @@ source = src/sourmash/
 [gh-actions]
 python =
   3.7: py37, coverage, codecov
-  3.8: py38, docs, package_description, fix_lint, coverage, codecov
+  3.8: py38, docs, package_description, coverage, codecov
   3.9: py39, coverage, codecov
 
 [flake8]