Repositories list

• contact-hunter

  Public archive
  Python

  •

  GNU General Public License v3.0

  •1•0•0•0•Updated Jun 15, 2022Jun 15, 2022

• Rana_amurensis_transcriptome_2021

  Public archive
  This repository contains the datasets described in the "De novo assembly and analysis of the transcriptome of the Siberian frog Rana amurensis" manuscript

  HTML

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  MIT License

  •0•0•0•0•Updated Oct 25, 2021Oct 25, 2021

• lipidomics_analysis_2021

  Public archive
  The Hitchhiker’s Guide to untargeted lipidomics analysis: Practical guidelines

  bioinformaticslc-mslipidomics

  R

  •1•0•0•0•Updated Oct 10, 2021Oct 10, 2021

• informME

  Public archive
  An information-theoretic pipeline for methylation analysis of WGBS data

  MATLAB

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  GNU General Public License v3.0

  •8•0•0•0•Updated Apr 23, 2021Apr 23, 2021

• HiCRestorationTools

  Public archive
  Two command line tools for restoring missing areas of Hi-C maps

  Python

  •0•0•0•0•Updated Nov 9, 2019Nov 9, 2019

• ArmatusParallel

  Public archive
  A parallel version of the Armatus software (https://github.com/kingsfordgroup/armatus)

  Makefile

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  MIT License

  •0•0•0•0•Updated Oct 17, 2019Oct 17, 2019

• SIRT6

  Public archive
  Jupyter Notebook

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  MIT License

  •0•0•0•0•Updated Oct 15, 2019Oct 15, 2019

• DeepLearningHiC

  Public archive
  Predicting missing parts in the chromosome conformation map (HI-C) using deep learning

  Jupyter Notebook

  •0•0•0•0•Updated Aug 31, 2019Aug 31, 2019