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Khrameeva Laboratory

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  1. DeepLearningHiC DeepLearningHiC Public archive

    Predicting missing parts in the chromosome conformation map (HI-C) using deep learning

    Jupyter Notebook

  2. SIRT6 SIRT6 Public archive

    Jupyter Notebook

  3. ArmatusParallel ArmatusParallel Public archive

    A parallel version of the Armatus software (https://github.com/kingsfordgroup/armatus)

    Makefile

  4. HiCRestorationTools HiCRestorationTools Public archive

    Two command line tools for restoring missing areas of Hi-C maps

    Python

  5. informME informME Public archive

    Forked from GarrettJenkinson/informME

    An information-theoretic pipeline for methylation analysis of WGBS data

    MATLAB 1

  6. lipidomics_analysis_2021 lipidomics_analysis_2021 Public archive

    The Hitchhiker’s Guide to untargeted lipidomics analysis: Practical guidelines

    R 1

Repositories

Showing 8 of 8 repositories
  • contact-hunter Public archive
    Khrameeva-Lab/contact-hunter’s past year of commit activity
    Python 0 GPL-3.0 1 0 0 Updated Jun 15, 2022
  • Rana_amurensis_transcriptome_2021 Public archive

    This repository contains the datasets described in the "De novo assembly and analysis of the transcriptome of the Siberian frog Rana amurensis" manuscript

    Khrameeva-Lab/Rana_amurensis_transcriptome_2021’s past year of commit activity
    HTML 0 MIT 0 0 0 Updated Oct 25, 2021
  • lipidomics_analysis_2021 Public archive

    The Hitchhiker’s Guide to untargeted lipidomics analysis: Practical guidelines

    Khrameeva-Lab/lipidomics_analysis_2021’s past year of commit activity
    R 0 1 0 0 Updated Oct 10, 2021
  • informME Public archive Forked from GarrettJenkinson/informME

    An information-theoretic pipeline for methylation analysis of WGBS data

    Khrameeva-Lab/informME’s past year of commit activity
    MATLAB 0 GPL-3.0 9 0 0 Updated Apr 23, 2021
  • HiCRestorationTools Public archive

    Two command line tools for restoring missing areas of Hi-C maps

    Khrameeva-Lab/HiCRestorationTools’s past year of commit activity
    Python 0 0 0 0 Updated Nov 9, 2019
  • ArmatusParallel Public archive

    A parallel version of the Armatus software (https://github.com/kingsfordgroup/armatus)

    Khrameeva-Lab/ArmatusParallel’s past year of commit activity
    Makefile 0 MIT 0 0 0 Updated Oct 17, 2019
  • SIRT6 Public archive
    Khrameeva-Lab/SIRT6’s past year of commit activity
    Jupyter Notebook 0 MIT 0 0 0 Updated Oct 15, 2019
  • DeepLearningHiC Public archive

    Predicting missing parts in the chromosome conformation map (HI-C) using deep learning

    Khrameeva-Lab/DeepLearningHiC’s past year of commit activity
    Jupyter Notebook 0 0 0 0 Updated Aug 31, 2019