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JPEG: warn if quality is outside [0.25, 1.0] #37

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JPEG: warn if quality is outside [0.25, 1.0] #37

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melissalinkert
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See ome/bio-formats-documentation#369 (review).

This can wait for Bio-Formats 8.0.0, it was just faster to open a PR than it was to write up an issue for later.

sbesson
sbesson reviewed Apr 12, 2024
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Using this together with the changes in ome/bioformats#4171

sbesson@Sebastiens-MacBook-Pro-3 bioformats % ./tools/bfconvert test.fake test.tiff -compression JPEG -quality 0.1
test.fake
FakeReader initializing test.fake
[Simulated data] -> test.tiff [Tagged Image File Format]
JPEG quality 0.1 too small, using 0.25
JPEG quality 0.1 too small, using 0.25
JPEG quality 0.1 too small, using 0.25
JPEG quality 0.1 too small, using 0.25
JPEG quality 0.1 too small, using 0.25
JPEG quality 0.1 too small, using 0.25
JPEG quality 0.1 too small, using 0.25
JPEG quality 0.1 too small, using 0.25
JPEG quality 0.1 too small, using 0.25
JPEG quality 0.1 too small, using 0.25
JPEG quality 0.1 too small, using 0.25
JPEG quality 0.1 too small, using 0.25
JPEG quality 0.1 too small, using 0.25
JPEG quality 0.1 too small, using 0.25
JPEG quality 0.1 too small, using 0.25
JPEG quality 0.1 too small, using 0.25
JPEG quality 0.1 too small, using 0.25
JPEG quality 0.1 too small, using 0.25
JPEG quality 0.1 too small, using 0.25
JPEG quality 0.1 too small, using 0.25
JPEG quality 0.1 too small, using 0.25
JPEG quality 0.1 too small, using 0.25
JPEG quality 0.1 too small, using 0.25
JPEG quality 0.1 too small, using 0.25
JPEG quality 0.1 too small, using 0.25
JPEG quality 0.1 too small, using 0.25
JPEG quality 0.1 too small, using 0.25
JPEG quality 0.1 too small, using 0.25
JPEG quality 0.1 too small, using 0.25
JPEG quality 0.1 too small, using 0.25
JPEG quality 0.1 too small, using 0.25
JPEG quality 0.1 too small, using 0.25
JPEG quality 0.1 too small, using 0.25
JPEG quality 0.1 too small, using 0.25
JPEG quality 0.1 too small, using 0.25
JPEG quality 0.1 too small, using 0.25
JPEG quality 0.1 too small, using 0.25
JPEG quality 0.1 too small, using 0.25
JPEG quality 0.1 too small, using 0.25
JPEG quality 0.1 too small, using 0.25
JPEG quality 0.1 too small, using 0.25
JPEG quality 0.1 too small, using 0.25
JPEG quality 0.1 too small, using 0.25
JPEG quality 0.1 too small, using 0.25
JPEG quality 0.1 too small, using 0.25
JPEG quality 0.1 too small, using 0.25
JPEG quality 0.1 too small, using 0.25
JPEG quality 0.1 too small, using 0.25
JPEG quality 0.1 too small, using 0.25
JPEG quality 0.1 too small, using 0.25
JPEG quality 0.1 too small, using 0.25
JPEG quality 0.1 too small, using 0.25
JPEG quality 0.1 too small, using 0.25
JPEG quality 0.1 too small, using 0.25
JPEG quality 0.1 too small, using 0.25
JPEG quality 0.1 too small, using 0.25
JPEG quality 0.1 too small, using 0.25
JPEG quality 0.1 too small, using 0.25
JPEG quality 0.1 too small, using 0.25
JPEG quality 0.1 too small, using 0.25
JPEG quality 0.1 too small, using 0.25
JPEG quality 0.1 too small, using 0.25
JPEG quality 0.1 too small, using 0.25
JPEG quality 0.1 too small, using 0.25
JPEG quality 0.1 too small, using 0.25
JPEG quality 0.1 too small, using 0.25
JPEG quality 0.1 too small, using 0.25
JPEG quality 0.1 too small, using 0.25
JPEG quality 0.1 too small, using 0.25
JPEG quality 0.1 too small, using 0.25
JPEG quality 0.1 too small, using 0.25
JPEG quality 0.1 too small, using 0.25
JPEG quality 0.1 too small, using 0.25
JPEG quality 0.1 too small, using 0.25
JPEG quality 0.1 too small, using 0.25
JPEG quality 0.1 too small, using 0.25
JPEG quality 0.1 too small, using 0.25
JPEG quality 0.1 too small, using 0.25
JPEG quality 0.1 too small, using 0.25
JPEG quality 0.1 too small, using 0.25
JPEG quality 0.1 too small, using 0.25
JPEG quality 0.1 too small, using 0.25
JPEG quality 0.1 too small, using 0.25
JPEG quality 0.1 too small, using 0.25
JPEG quality 0.1 too small, using 0.25
JPEG quality 0.1 too small, using 0.25
JPEG quality 0.1 too small, using 0.25
JPEG quality 0.1 too small, using 0.25
JPEG quality 0.1 too small, using 0.25
JPEG quality 0.1 too small, using 0.25
JPEG quality 0.1 too small, using 0.25
JPEG quality 0.1 too small, using 0.25
JPEG quality 0.1 too small, using 0.25
JPEG quality 0.1 too small, using 0.25
JPEG quality 0.1 too small, using 0.25
JPEG quality 0.1 too small, using 0.25
JPEG quality 0.1 too small, using 0.25
JPEG quality 0.1 too small, using 0.25
JPEG quality 0.1 too small, using 0.25
JPEG quality 0.1 too small, using 0.25
JPEG quality 0.1 too small, using 0.25
JPEG quality 0.1 too small, using 0.25
JPEG quality 0.1 too small, using 0.25
JPEG quality 0.1 too small, using 0.25
JPEG quality 0.1 too small, using 0.25
JPEG quality 0.1 too small, using 0.25
JPEG quality 0.1 too small, using 0.25
JPEG quality 0.1 too small, using 0.25
JPEG quality 0.1 too small, using 0.25
JPEG quality 0.1 too small, using 0.25
JPEG quality 0.1 too small, using 0.25
JPEG quality 0.1 too small, using 0.25
JPEG quality 0.1 too small, using 0.25
JPEG quality 0.1 too small, using 0.25
JPEG quality 0.1 too small, using 0.25
JPEG quality 0.1 too small, using 0.25
JPEG quality 0.1 too small, using 0.25
JPEG quality 0.1 too small, using 0.25
JPEG quality 0.1 too small, using 0.25
JPEG quality 0.1 too small, using 0.25
JPEG quality 0.1 too small, using 0.25
JPEG quality 0.1 too small, using 0.25
JPEG quality 0.1 too small, using 0.25
JPEG quality 0.1 too small, using 0.25
JPEG quality 0.1 too small, using 0.25
JPEG quality 0.1 too small, using 0.25
JPEG quality 0.1 too small, using 0.25
JPEG quality 0.1 too small, using 0.25
JPEG quality 0.1 too small, using 0.25
JPEG quality 0.1 too small, using 0.25
JPEG quality 0.1 too small, using 0.25
JPEG quality 0.1 too small, using 0.25
JPEG quality 0.1 too small, using 0.25
JPEG quality 0.1 too small, using 0.25
JPEG quality 0.1 too small, using 0.25
JPEG quality 0.1 too small, using 0.25
JPEG quality 0.1 too small, using 0.25
JPEG quality 0.1 too small, using 0.25
JPEG quality 0.1 too small, using 0.25
JPEG quality 0.1 too small, using 0.25
JPEG quality 0.1 too small, using 0.25
JPEG quality 0.1 too small, using 0.25
JPEG quality 0.1 too small, using 0.25
JPEG quality 0.1 too small, using 0.25
JPEG quality 0.1 too small, using 0.25
JPEG quality 0.1 too small, using 0.25
JPEG quality 0.1 too small, using 0.25
JPEG quality 0.1 too small, using 0.25
JPEG quality 0.1 too small, using 0.25
JPEG quality 0.1 too small, using 0.25
JPEG quality 0.1 too small, using 0.25
JPEG quality 0.1 too small, using 0.25
JPEG quality 0.1 too small, using 0.25
JPEG quality 0.1 too small, using 0.25
JPEG quality 0.1 too small, using 0.25
JPEG quality 0.1 too small, using 0.25
JPEG quality 0.1 too small, using 0.25
JPEG quality 0.1 too small, using 0.25
JPEG quality 0.1 too small, using 0.25
JPEG quality 0.1 too small, using 0.25
JPEG quality 0.1 too small, using 0.25
JPEG quality 0.1 too small, using 0.25
JPEG quality 0.1 too small, using 0.25
JPEG quality 0.1 too small, using 0.25
JPEG quality 0.1 too small, using 0.25
JPEG quality 0.1 too small, using 0.25
JPEG quality 0.1 too small, using 0.25
JPEG quality 0.1 too small, using 0.25
JPEG quality 0.1 too small, using 0.25
JPEG quality 0.1 too small, using 0.25
JPEG quality 0.1 too small, using 0.25
JPEG quality 0.1 too small, using 0.25
JPEG quality 0.1 too small, using 0.25
JPEG quality 0.1 too small, using 0.25
JPEG quality 0.1 too small, using 0.25
JPEG quality 0.1 too small, using 0.25
JPEG quality 0.1 too small, using 0.25
JPEG quality 0.1 too small, using 0.25
JPEG quality 0.1 too small, using 0.25
JPEG quality 0.1 too small, using 0.25
JPEG quality 0.1 too small, using 0.25
JPEG quality 0.1 too small, using 0.25
JPEG quality 0.1 too small, using 0.25
JPEG quality 0.1 too small, using 0.25
JPEG quality 0.1 too small, using 0.25
JPEG quality 0.1 too small, using 0.25
JPEG quality 0.1 too small, using 0.25
JPEG quality 0.1 too small, using 0.25
JPEG quality 0.1 too small, using 0.25
JPEG quality 0.1 too small, using 0.25
JPEG quality 0.1 too small, using 0.25
JPEG quality 0.1 too small, using 0.25
JPEG quality 0.1 too small, using 0.25
JPEG quality 0.1 too small, using 0.25
JPEG quality 0.1 too small, using 0.25
JPEG quality 0.1 too small, using 0.25
JPEG quality 0.1 too small, using 0.25
JPEG quality 0.1 too small, using 0.25
JPEG quality 0.1 too small, using 0.25
JPEG quality 0.1 too small, using 0.25
JPEG quality 0.1 too small, using 0.25
JPEG quality 0.1 too small, using 0.25
JPEG quality 0.1 too small, using 0.25
JPEG quality 0.1 too small, using 0.25
JPEG quality 0.1 too small, using 0.25
JPEG quality 0.1 too small, using 0.25
JPEG quality 0.1 too small, using 0.25
JPEG quality 0.1 too small, using 0.25
JPEG quality 0.1 too small, using 0.25
JPEG quality 0.1 too small, using 0.25
JPEG quality 0.1 too small, using 0.25
JPEG quality 0.1 too small, using 0.25
JPEG quality 0.1 too small, using 0.25
JPEG quality 0.1 too small, using 0.25
JPEG quality 0.1 too small, using 0.25
JPEG quality 0.1 too small, using 0.25
JPEG quality 0.1 too small, using 0.25
JPEG quality 0.1 too small, using 0.25
JPEG quality 0.1 too small, using 0.25
JPEG quality 0.1 too small, using 0.25
JPEG quality 0.1 too small, using 0.25
JPEG quality 0.1 too small, using 0.25
JPEG quality 0.1 too small, using 0.25
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JPEG quality 0.1 too small, using 0.25
JPEG quality 0.1 too small, using 0.25
JPEG quality 0.1 too small, using 0.25
JPEG quality 0.1 too small, using 0.25
JPEG quality 0.1 too small, using 0.25
JPEG quality 0.1 too small, using 0.25
JPEG quality 0.1 too small, using 0.25
JPEG quality 0.1 too small, using 0.25
JPEG quality 0.1 too small, using 0.25
JPEG quality 0.1 too small, using 0.25
JPEG quality 0.1 too small, using 0.25
JPEG quality 0.1 too small, using 0.25
JPEG quality 0.1 too small, using 0.25
JPEG quality 0.1 too small, using 0.25
JPEG quality 0.1 too small, using 0.25
JPEG quality 0.1 too small, using 0.25
JPEG quality 0.1 too small, using 0.25
JPEG quality 0.1 too small, using 0.25
JPEG quality 0.1 too small, using 0.25
JPEG quality 0.1 too small, using 0.25
JPEG quality 0.1 too small, using 0.25
JPEG quality 0.1 too small, using 0.25
JPEG quality 0.1 too small, using 0.25
JPEG quality 0.1 too small, using 0.25
JPEG quality 0.1 too small, using 0.25
JPEG quality 0.1 too small, using 0.25
JPEG quality 0.1 too small, using 0.25
JPEG quality 0.1 too small, using 0.25
JPEG quality 0.1 too small, using 0.25
JPEG quality 0.1 too small, using 0.25
JPEG quality 0.1 too small, using 0.25
JPEG quality 0.1 too small, using 0.25
JPEG quality 0.1 too small, using 0.25
JPEG quality 0.1 too small, using 0.25
JPEG quality 0.1 too small, using 0.25
JPEG quality 0.1 too small, using 0.25
JPEG quality 0.1 too small, using 0.25
JPEG quality 0.1 too small, using 0.25
JPEG quality 0.1 too small, using 0.25
JPEG quality 0.1 too small, using 0.25
JPEG quality 0.1 too small, using 0.25
JPEG quality 0.1 too small, using 0.25
JPEG quality 0.1 too small, using 0.25
JPEG quality 0.1 too small, using 0.25
JPEG quality 0.1 too small, using 0.25
JPEG quality 0.1 too small, using 0.25
JPEG quality 0.1 too small, using 0.25
JPEG quality 0.1 too small, using 0.25
JPEG quality 0.1 too small, using 0.25
JPEG quality 0.1 too small, using 0.25
JPEG quality 0.1 too small, using 0.25
JPEG quality 0.1 too small, using 0.25
JPEG quality 0.1 too small, using 0.25
JPEG quality 0.1 too small, using 0.25
JPEG quality 0.1 too small, using 0.25
JPEG quality 0.1 too small, using 0.25
JPEG quality 0.1 too small, using 0.25
JPEG quality 0.1 too small, using 0.25
JPEG quality 0.1 too small, using 0.25
JPEG quality 0.1 too small, using 0.25
JPEG quality 0.1 too small, using 0.25
JPEG quality 0.1 too small, using 0.25
JPEG quality 0.1 too small, using 0.25
JPEG quality 0.1 too small, using 0.25
JPEG quality 0.1 too small, using 0.25
JPEG quality 0.1 too small, using 0.25
JPEG quality 0.1 too small, using 0.25
JPEG quality 0.1 too small, using 0.25
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JPEG quality 0.1 too small, using 0.25
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JPEG quality 0.1 too small, using 0.25
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JPEG quality 0.1 too small, using 0.25
JPEG quality 0.1 too small, using 0.25
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JPEG quality 0.1 too small, using 0.25
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JPEG quality 0.1 too small, using 0.25
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JPEG quality 0.1 too small, using 0.25
JPEG quality 0.1 too small, using 0.25
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JPEG quality 0.1 too small, using 0.25
JPEG quality 0.1 too small, using 0.25
JPEG quality 0.1 too small, using 0.25
JPEG quality 0.1 too small, using 0.25
JPEG quality 0.1 too small, using 0.25
JPEG quality 0.1 too small, using 0.25
JPEG quality 0.1 too small, using 0.25
JPEG quality 0.1 too small, using 0.25
JPEG quality 0.1 too small, using 0.25
JPEG quality 0.1 too small, using 0.25
JPEG quality 0.1 too small, using 0.25
JPEG quality 0.1 too small, using 0.25
JPEG quality 0.1 too small, using 0.25
JPEG quality 0.1 too small, using 0.25
JPEG quality 0.1 too small, using 0.25
JPEG quality 0.1 too small, using 0.25
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JPEG quality 0.1 too small, using 0.25
JPEG quality 0.1 too small, using 0.25
JPEG quality 0.1 too small, using 0.25
JPEG quality 0.1 too small, using 0.25
JPEG quality 0.1 too small, using 0.25
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JPEG quality 0.1 too small, using 0.25
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JPEG quality 0.1 too small, using 0.25
JPEG quality 0.1 too small, using 0.25
JPEG quality 0.1 too small, using 0.25
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JPEG quality 0.1 too small, using 0.25
JPEG quality 0.1 too small, using 0.25
JPEG quality 0.1 too small, using 0.25
JPEG quality 0.1 too small, using 0.25
JPEG quality 0.1 too small, using 0.25
JPEG quality 0.1 too small, using 0.25
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JPEG quality 0.1 too small, using 0.25
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JPEG quality 0.1 too small, using 0.25
JPEG quality 0.1 too small, using 0.25
JPEG quality 0.1 too small, using 0.25
JPEG quality 0.1 too small, using 0.25
JPEG quality 0.1 too small, using 0.25
JPEG quality 0.1 too small, using 0.25
JPEG quality 0.1 too small, using 0.25
JPEG quality 0.1 too small, using 0.25
JPEG quality 0.1 too small, using 0.25
JPEG quality 0.1 too small, using 0.25
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JPEG quality 0.1 too small, using 0.25
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JPEG quality 0.1 too small, using 0.25
JPEG quality 0.1 too small, using 0.25
JPEG quality 0.1 too small, using 0.25
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JPEG quality 0.1 too small, using 0.25
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JPEG quality 0.1 too small, using 0.25
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JPEG quality 0.1 too small, using 0.25
JPEG quality 0.1 too small, using 0.25
JPEG quality 0.1 too small, using 0.25
JPEG quality 0.1 too small, using 0.25
JPEG quality 0.1 too small, using 0.25
JPEG quality 0.1 too small, using 0.25
JPEG quality 0.1 too small, using 0.25
JPEG quality 0.1 too small, using 0.25
JPEG quality 0.1 too small, using 0.25
JPEG quality 0.1 too small, using 0.25
JPEG quality 0.1 too small, using 0.25
JPEG quality 0.1 too small, using 0.25
JPEG quality 0.1 too small, using 0.25
JPEG quality 0.1 too small, using 0.25
JPEG quality 0.1 too small, using 0.25
	Converted 1/1 planes (100%)
[done]
0.744s elapsed (10.0+278.0ms per plane, 450ms overhead)
sbesson@Sebastiens-MacBook-Pro-3 bioformats % rm test.tiff 
sbesson@Sebastiens-MacBook-Pro-3 bioformats % ./tools/bfconvert test.fake test.tiff -compression JPEG -quality 1.1
test.fake
FakeReader initializing test.fake
[Simulated data] -> test.tiff [Tagged Image File Format]
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	Converted 1/1 planes (100%)
[done]
0.645s elapsed (9.0+215.0ms per plane, 415ms overhead)
sbesson@Sebastiens-MacBook-Pro-3 bioformats %

The warning message makes sense. The obvious downside is that it's printed on every invocation of JPEGCodec.compress and thus quite verbose.

@melissalinkert
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At this point, I'm inclined to either switch the level to DEBUG, or just close this. I don't have a great idea for how to both reduce the verbosity and catch all cases where the provided quality is out of bounds. Since the quality is automatically adjusted to be in bounds, I think the worst case is that the quality ends up being unexpectedly higher than intended.

@melissalinkert
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As discussed earlier with @joshmoore / @sbesson / @jburel, closing this without merging.

A few ideas were discussed, but rejected:

  • configure logging to collapse all messages with the same content
  • automatically adjust invalid quality settings in bfconvert
  • use a ThreadLocal within the codec so that the warning is printed once per thread

All are more work and higher impact than is warranted here, given that https://bio-formats.readthedocs.io/en/stable/users/comlinetools/conversion.html#cmdoption-bfconvert-quality documents the expected range of quality values.

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@melissalinkert @sbesson