Code

Updates to vaccination #59

Code

Merged

ruthmccabe merged 29 commits intomainmrc-ide/mpoxseir:mainfrom fix-vaccinationmrc-ide/mpoxseir:fix-vaccinationCopy head branch name to clipboardJan 15, 2025

+568-576

Commits

Commits on Jan 10, 2025

• children_ind_raw -> is_child;

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• children_ind_raw -> is_child

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  2ade9b5

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• update tests children_ind_raw -> is_child

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  ca5a6ff

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• regenerate model

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• FOI tidy - instead of having ve_I included in each of the 4 components separately this is now moved to the line where they are combined

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• coverage_achieved -> coverage_target as I think more intuitive

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• simplify target_met_children_t (can be vector not matrix)

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• simplify target_met_children_t

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• undo FOI tidy which it did NOT like; regenerate model

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  4e240f8

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• rewriting of vaccination components based on 1) eligibility 2) prioritisation and 3) target reached or not

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• regenerate model for testing purposes

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• test name updated (not relevant to this PR just found it as checking tests)

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• as before just tidied test name (not PR specific)

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• tidy model notes

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• bump version

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• update news

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• tidying up code from trying to tidy FOI

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• Merge branch 'main' into fix-vaccination

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• re-update description

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• remove accidental extra line

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Commits on Jan 13, 2025

• Merge branch 'main' into fix-vaccination

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• update packages & regenerate

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• Merge branch 'fix-vaccination' of https://github.com/mrc-ide/mpoxseir into fix-vaccination

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Commits on Jan 15, 2025

• Update NEWS.md

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• Tidy code as per Lilith's suggestion

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• Tidy code as per Lilith's suggestion

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• Tidy code as per Lilith's suggestion

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• extra bracket removed

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• regen model post review comments

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