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merge in cstarvation params and main, update xml patch file #9

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@rgknox rgknox commented Feb 5, 2024

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glemieux and others added 30 commits August 9, 2023 15:40
Update biomass partitioning to coarse woody debris

These changes update the cwd partitioning for small
cohorts to be based on cohort dbh such that stem
biomass is sent to the appropriate cwd class based
on the Rothermel fuel class diameter thresholds.
This tag adds environmentaly sensitive tree recruitment, work by Adam Hanbury-Brown. These features are not enabled by default, but can be set with the regeneration_model integer switch in the parameter file.
Refactors fates patch and cohort types into their own modules and
changes the namespace for these types as well, necessitating a major API update.
…bels

Use a simple scheme in which we fuse the very young patch into the largest patch in the list
rgknox and others added 28 commits January 12, 2024 13:27
two-stream - b4b Norman and no history changes
…porting

Two-stream radiation has been added. It can be activated as an alternative to norman radiation by setting fates_rad_mod=2
Additional (optional) output for crown area
Updated description for stress/drought deciduous flag
Revised quadratic equation solver for handling exceptions.
In this tag Marcos Longo improved the quadratic solver FATES uses for photosynthesis, the update improves error handling and accommodates edge cases that would had otherwise tripped up the old sover
…v_term_reporting

Carbon starvation termination mortality reporting
Disable hydraulic failure mortality for leafless plants
temporarily revert the c starvation parameter file flag
Exponential-based carbon starvation mortality function
@mpaiao mpaiao merged commit 92d0dff into mpaiao:mpaiao-pr-allom-modes Feb 5, 2024
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7 participants