Skip to content
New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

Start work on medication related resources #28

Merged
merged 29 commits into from
Jan 9, 2023
Merged
Show file tree
Hide file tree
Changes from all commits
Commits
Show all changes
29 commits
Select commit Hold shift + click to select a range
49dc7ef
Add intro text to the IG front page
mrinnetmaki Dec 29, 2022
9157572
Fix spelling, add justification.
mrinnetmaki Dec 29, 2022
ec004a9
Fix headings, add formal info
mrinnetmaki Dec 30, 2022
548fe45
Add structure and content
mrinnetmaki Dec 30, 2022
ebdfcb6
Include some context to version history
mrinnetmaki Dec 30, 2022
2560fb0
Omit ToC from header, for now
mrinnetmaki Dec 30, 2022
a927f71
Move examples to a directory
mrinnetmaki Dec 30, 2022
d5f71fe
Fix file name typo
mrinnetmaki Dec 30, 2022
253bdf7
List examples in main menu
mrinnetmaki Dec 30, 2022
1450221
Use Finnish Base instead of Finnish Core
mrinnetmaki Dec 30, 2022
3691b0e
Add code system to language
mrinnetmaki Dec 30, 2022
d63f48e
Fix links
mrinnetmaki Dec 30, 2022
4d6d605
Name example, use the Title
mrinnetmaki Dec 30, 2022
fce2a57
Rename profiles
mrinnetmaki Dec 30, 2022
bd2046e
Base profiles on IPA, where applicable
mrinnetmaki Dec 30, 2022
35d580c
Import raw resources from Kanta PHR
mrinnetmaki Dec 31, 2022
f7b59da
Add missing id's
mrinnetmaki Dec 31, 2022
cf61b18
Remove the Kanta PHR IG resource
mrinnetmaki Dec 31, 2022
fb1a2b5
Fix duplicate id's
mrinnetmaki Dec 31, 2022
c13c5c5
Move Kanta PHR stuff to examples
mrinnetmaki Dec 31, 2022
a0dee0c
Fix resource titles
mrinnetmaki Dec 31, 2022
b95d3cb
List both FI Base and Kanta PHR profiles
mrinnetmaki Dec 31, 2022
d94d356
Remove extra pipe from footer
mrinnetmaki Jan 1, 2023
2abf807
Add descriptive text about extensions
mrinnetmaki Jan 1, 2023
07b83d1
Add descriptive text about terminologies
mrinnetmaki Jan 1, 2023
e4ee46a
Add the STU note about the status of the ig
mrinnetmaki Jan 1, 2023
d2c2521
Add title to example categories
mrinnetmaki Jan 1, 2023
8f17a71
Sort profiles alphabetically
mrinnetmaki Jan 4, 2023
9d1cf79
Start work on medication related resources
mrinnetmaki Jan 4, 2023
File filter

Filter by extension

Filter by extension

Conversations
Failed to load comments.
Loading
Jump to
Jump to file
Failed to load files.
Loading
Diff view
Diff view
4 changes: 2 additions & 2 deletions README.md
Original file line number Diff line number Diff line change
Expand Up @@ -13,7 +13,7 @@ The profiles will be based on R4, [FHIR 4.0.1](http://hl7.org/fhir/R4/).

## Published Snapshot

The working version of the IG is published at https://fhir.fi/finnish-base-profiles/.
The working version of the IG is published at https://fhir.fi/fi-base-profiles/.

## Companion Specifications

Expand Down Expand Up @@ -72,4 +72,4 @@ docker-compose run runner bash -c "cd /workdir && ./_updatePublisher.sh --yes"
docker-compose run runner bash -c "cd /workdir && ./_genonce.sh"
```

Html output will be generated to `output/StructureDefinition-FinnishCorePatient.html`.
Html output will be generated to `output/StructureDefinition-FiBasePatient.html`.
158 changes: 158 additions & 0 deletions input/examples/Bloodglucose-max.json
Original file line number Diff line number Diff line change
@@ -0,0 +1,158 @@
{
"resourceType": "Observation",
"id": "bloodglucose-max",
"meta": {
"profile": [
"http://phr.kanta.fi/StructureDefinition/fiphr-sd-bloodglucose",
"http://example.org/StructureDefinition/other-bloodglucose-structuredefinition"
],
"security": [
{
"code": "U",
"system": "http://terminology.hl7.org/CodeSystem/v3-Confidentiality",
"display": "unrestricted"
}
]
},
"language": "en",
"identifier": [
{
"system": "urn:ietf:rfc:3986",
"value": "urn:uuid:206fc986-517a-4054-bc0a-03eb906c9571"
},
{
"system": "urn:ietf:rfc:39862",
"value": "urn:uuid:be18620b-ee17-4bd6-8304-102fdd10a38c2"
}
],
"status": "final",
"category": [
{
"coding": [
{
"system": "http://terminology.hl7.org/CodeSystem/observation-category",
"code": "vital-signs"
},
{
"system": "http://example.org/CodeSystem/categories",
"code": "observation"
}
]
}
],
"code": {
"coding": [
{
"system": "http://loinc.org",
"code": "15074-8",
"display": "Glucose (Bld) [Moles/Vol]"
},
{
"system": "http://loinc.org",
"code": "14743-9",
"display": "Glucose Glucometer (BldC) [Moles/Vol]"
},
{
"system": "http://loinc.org",
"code": "14745-4",
"display": "Glucose (Body fld) [Moles/Vol]"
},
{
"system": "http://example.org",
"code": "12345",
"display": "Glucose [Moles/Vol]"
}
]
},
"subject": {
"reference": "Patient/f1fa0b52-eccf-44af-96c7-84a3251bb22c"
},
"effectiveDateTime": "2020-10-05",
"issued": "2019-12-05T09:21:37.130+02:00",
"performer": [
{
"reference": "Patient/f1fa0b52-eccf-44af-96c7-84a3251bb22c"
}
],
"valueQuantity": {
"value": 10.0,
"unit": "mmol/l",
"comparator": "<",
"system": "http://unitsofmeasure.org",
"code": "mmol/L",
"extension": [
{
"url": "http://hl7.org/fhir/StructureDefinition/iso21090-PQ-translation",
"valueQuantity": {
"value": 2,
"unit": "mg/dl",
"system": "http://unitsofmeasure.org",
"code": "mg/dL"
}
}
]
},
"interpretation": [
{
"coding": [
{
"system": "http://terminology.hl7.org/CodeSystem/v3-ObservationInterpretation",
"code": "<",
"display": "Off scale low"
}
]
}
],
"note": [
{
"text": "käyttäjän lisäämä kommentti"
}
],
"referenceRange": [
{
"low": {
"value": 16,
"unit": "mmol/l",
"system": "http://unitsofmeasure.org",
"code": "mg/dL"
},
"high": {
"value": 10,
"unit": "mmol/l",
"system": "http://unitsofmeasure.org",
"code": "mg/dL"
},
"appliesTo": [
{
"coding": [
{
"system": "http://snomed.info/sct",
"code": "248153007",
"display": "Male"
}
],
"text": "Normal range"
}
],
"age": {
"low": {
"value": 15,
"unit": "years",
"system": "http://unitsofmeasure.org",
"code": "a"
},
"high": {
"value": 100,
"unit": "years",
"system": "http://unitsofmeasure.org",
"code": "a"
}
},
"text": "Age"
}
],
"text": {
"status": "generated",
"div": "<div xmlns=\"http://www.w3.org/1999/xhtml\" lang=\"en\" xml:lang=\"en\"><div class=\"hapiHeaderText\"><b>Verensokeri</b></div><table class=\"hapiPropertyTable\"><tbody><tr><td>Subject</td><td>Patient/f1fa0b52-eccf-44af-96c7-84a3251bb22c</td></tr><tr><td>Code</td><td>ins-short-fast</td></tr><tr><td>Display</td><td>Fast-acting insulin</td></tr><tr><td>Text</td><td>Lyhytvaikutteinen insuliini</td></tr></tbody></table></div>"
}
}
Loading