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0.14.0 Release#200

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donaldcampbelljr merged 23 commits intomasterdatabio/pypiper:masterfrom devdatabio/pypiper:devCopy head branch name to clipboardDec 22, 2023

+103-77

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Commits on Sep 6, 2023

• try getting just stage name, but fall back to str representation of stage; close #197

  vreuter

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  0c9b16f

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Commits on Oct 4, 2023

• version 0.13.3a1 for pipestat 0.6.0a1

  donaldcampbelljr

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  0b430c7

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Commits on Nov 7, 2023

• updated to pipestat 0.6.0

  khoroshevskyi

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  d9c818d

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• Merge branch 'dev' into new_pipestat

  khoroshevskyi

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  e30fe6e

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• updated requirements

  khoroshevskyi

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  e00e8d8

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• testing, drop python 3.7

  khoroshevskyi

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  39b6e99

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• Merge pull request #198 from vreuter/vr/stage-log-message-197

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  khoroshevskyi

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Commits on Nov 8, 2023

• fix f-string quote issue for python 3.10

  donaldcampbelljr

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  1c2c844

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Commits on Nov 10, 2023

• minor refactor to use pipestat properties instead of cfg dict

  donaldcampbelljr

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  5b46682

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• update changelog and version number

  donaldcampbelljr

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  d360ba1

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• Merge pull request #199 from databio/new_pipestat

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  donaldcampbelljr

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Commits on Nov 14, 2023

• update v0.13.3 and changelog

  donaldcampbelljr

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  4ea21c2

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• fix _refresh_stats bug and change version to 0.14.0

  donaldcampbelljr

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  ed6b7fb

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Commits on Nov 15, 2023

• potential fix for #201

  donaldcampbelljr

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  b0c5f8d

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• changelog

  donaldcampbelljr

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  d7b9c8c

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• v0.14.0a1 prerelease

  donaldcampbelljr

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Commits on Nov 20, 2023

• report_object -> change message_raw to be a values dict to conform with pipestat output schemas

  donaldcampbelljr

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  1a677da

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• self.pipestat_results_file should take priority over self.pipeline_stats_file related to databio/pepatac#257

  donaldcampbelljr

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Commits on Nov 27, 2023

• make pipestat_results_file = pipeline_stats_file if it is not provided

  donaldcampbelljr

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• set pipeline_stats_file if pipestat_results_file IS provided, remove checking for the first record_identifier during get_stat

  donaldcampbelljr

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  2de4e84

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Commits on Dec 8, 2023

• add pipestat_pipeline_type, defaulting to sample

  donaldcampbelljr

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Commits on Dec 14, 2023

• pipestat req version bump, v0.14.0a2 bump for pre-release

  donaldcampbelljr

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  649c985

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Commits on Dec 22, 2023

• v0.14.0 release prep

  donaldcampbelljr

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