Code

Feature added: Get WSI at mpp#7574

Code

Open

NikolasSchmitz wants to merge 34 commits intoProject-MONAI:devProject-MONAI/MONAI:devfrom NikolasSchmitz:4980-get-wsi-at-mppNikolasSchmitz/MONAI:4980-get-wsi-at-mppCopy head branch name to clipboard

+273-5

Commits

Commits on Mar 22, 2024

• Added function get_img_at_mpp to class OpenSlideWSIReader of module wsi_reader.py

  

  Nikolas Schmitz

  committed
  f3e7d03

  Copy full SHA for f3e7d03

• Added get_img_at_mpp to class CuCIMWSIReader

  

  Nikolas Schmitz

  committed
  88002e8

  Copy full SHA for 88002e8

Commits on Mar 24, 2024

• Added function get_img_at_mpp to class TifffileWSIReader; changed resizing function to Image.resize, cucim.skimage.transform.resize

  

  Nikolas Schmitz

  committed
  a9fe772

  Copy full SHA for a9fe772

• Small changes

  

  Nikolas Schmitz

  committed
  feac0dc

  Copy full SHA for feac0dc

• Small changes

  

  Nikolas Schmitz

  committed
  8194026

  Copy full SHA for 8194026

Commits on Mar 27, 2024

• Stein's Unbiased Risk Estimator (SURE) loss and Conjugate Gradient (Project-MONAI#7308)

  Show description for 4df0b4b
  

  4 peopleauthored and

  NikolasSchmitz

  committed
  4df0b4b

  Copy full SHA for 4df0b4b

• Renamed function to get_wsi_at_mpp

  Show description for d989c18
  

  Nikolas Schmitz

  authored and

  NikolasSchmitz

  committed
  d989c18

  Copy full SHA for d989c18

• [pre-commit.ci] auto fixes from pre-commit.com hooks

  Show description for 105f00b
  

  pre-commit-ci[bot]

  authored and

  NikolasSchmitz

  committed
  105f00b

  Copy full SHA for 105f00b

• Reformatted wsi_reader.py

  Show description for 5db27c1
  NikolasSchmitz

  committed
  5db27c1

  Copy full SHA for 5db27c1

• auto updates (Project-MONAI#7577)

  Show description for 18e82bd
  

  monai-bot

  authored and

  NikolasSchmitz

  committed
  18e82bd

  Copy full SHA for 18e82bd

• Fixed return type

  Show description for 5bb531e
  NikolasSchmitz

  committed
  5bb531e

  Copy full SHA for 5bb531e

• Small fixes

  Show description for 5214c56
  NikolasSchmitz

  committed
  5214c56

  Copy full SHA for 5214c56

• Remove nested error propagation on ConfigComponent instantiate (Project-MONAI#7569)

  Show description for 3f055a9
  

  2 peopleauthored and

  NikolasSchmitz

  committed
  3f055a9

  Copy full SHA for 3f055a9

• 2872 implementation of mixup, cutmix and cutout (Project-MONAI#7198)

  Show description for 3264079
  

  27 peopleauthored and

  NikolasSchmitz

  committed
  3264079

  Copy full SHA for 3264079

Commits on Apr 9, 2024

• Merge branch 'dev' into 4980-get-wsi-at-mpp

  Show description for 22ecc8c
  bhashemian

  authored
  22ecc8c

  Copy full SHA for 22ecc8c

Commits on Jul 31, 2024

• Updated function get_wsi_at_mpp; added function _resize_to_mpp_res to reduce redundancy; for get_mpp of TiffFileWSIReader: added check to prevent division by zero error.

  NikolasSchmitz

  committed
  6fcc4a6

  Copy full SHA for 6fcc4a6

• Minor fixes: removed unnecessary comments

  NikolasSchmitz

  committed
  4b0c9ba

  Copy full SHA for 4b0c9ba

Commits on Aug 2, 2024

• Merge branch 'dev' into 4980-get-wsi-at-mpp

  Show description for d1a5e28
  NikolasSchmitz

  authored
  d1a5e28

  Copy full SHA for d1a5e28

• [pre-commit.ci] auto fixes from pre-commit.com hooks

  Show description for 66508e9
  pre-commit-ci[bot]

  committed
  66508e9

  Copy full SHA for 66508e9

Commits on Aug 4, 2024

• Added function _compute_mpp_target_res to BaseWSIReader

  NikolasSchmitz

  committed
  441b462

  Copy full SHA for 441b462

• Added new feature and merged updates from main repository

  NikolasSchmitz

  committed
  d73d739

  Copy full SHA for d73d739

• Added function _compute_mpp_target_res to BaseWSIReader

  NikolasSchmitz

  committed
  feb6828

  Copy full SHA for feb6828

• [pre-commit.ci] auto fixes from pre-commit.com hooks

  Show description for 5461801
  pre-commit-ci[bot]

  committed
  5461801

  Copy full SHA for 5461801

Commits on Aug 7, 2024

• Merge branch 'dev' into 4980-get-wsi-at-mpp

  ericspod

  authored
  e8c1544

  Copy full SHA for e8c1544

Commits on Aug 11, 2024

• Added a function _compute_mpp_tolerances which checks the mpp tolerances to BaseWSIReader; Edited docstrings

  NikolasSchmitz

  committed
  59683bc

  Copy full SHA for 59683bc

• [pre-commit.ci] auto fixes from pre-commit.com hooks

  Show description for 547442e
  pre-commit-ci[bot]

  committed
  547442e

  Copy full SHA for 547442e

Commits on Aug 14, 2024

• Merge branch 'Project-MONAI:dev' into 4980-get-wsi-at-mpp

  NikolasSchmitz

  authored
  3e337b0

  Copy full SHA for 3e337b0

Commits on Aug 27, 2024

• Merge branch 'Project-MONAI:dev' into 4980-get-wsi-at-mpp

  NikolasSchmitz

  authored
  cc55b8a

  Copy full SHA for cc55b8a

Commits on Sep 10, 2024

• Merge branch 'Project-MONAI:dev' into 4980-get-wsi-at-mpp

  NikolasSchmitz

  authored
  9eca8de

  Copy full SHA for 9eca8de

Commits on Sep 16, 2024

• Merge branch 'Project-MONAI:dev' into 4980-get-wsi-at-mpp

  NikolasSchmitz

  authored
  a8bb436

  Copy full SHA for a8bb436

Commits on Sep 21, 2024

• Merge branch 'Project-MONAI:dev' into 4980-get-wsi-at-mpp

  NikolasSchmitz

  authored
  6094ffd

  Copy full SHA for 6094ffd

Commits on Nov 17, 2024

• Merge branch 'Project-MONAI:dev' into 4980-get-wsi-at-mpp

  NikolasSchmitz

  authored
  c1dd7c3

  Copy full SHA for c1dd7c3

Commits on Dec 3, 2024

• Merge branch 'Project-MONAI:dev' into 4980-get-wsi-at-mpp

  NikolasSchmitz

  authored
  349c011

  Copy full SHA for 349c011

Commits on Jan 8, 2025

• Merge branch 'Project-MONAI:dev' into 4980-get-wsi-at-mpp

  NikolasSchmitz

  authored
  ca6796b

  Copy full SHA for ca6796b