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addidentally deleted an r
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sjspielman committed Jan 14, 2025
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Expand Up @@ -222,7 +222,7 @@ cell_metric_list <- cluster_results_list |>
silhouette_df <- rOpenScPCA::calculate_silhouette(pca_matrix, cluster_df)
# calculate neighbhorhood purity, starting from silhouette_df
OpenScPCA::calculate_purity(pca_matrix, silhouette_df)
rOpenScPCA::calculate_purity(pca_matrix, silhouette_df)
}
)
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