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robertdstein committed Dec 6, 2024
1 parent 24543e7 commit 1f49b82
Showing 1 changed file with 3 additions and 2 deletions.
5 changes: 3 additions & 2 deletions mirar/pipelines/wasp/blocks.py
Original file line number Diff line number Diff line change
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load_raw = [
ImageLoader(input_sub_dir="raw", load_image=load_raw_wasp_image),
CustomImageBatchModifier(label_stack_id),
ImageBatcher(BASE_NAME_KEY),
ImageRebatcher(split_key="stackid"),
CustomImageBatchModifier(annotate_target_coordinates),
ImageRebatcher(BASE_NAME_KEY),
]


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cache=False,
),
ImageRebatcher(split_key=["stackid"]),
CustomImageBatchModifier(annotate_target_coordinates),
Swarp(
swarp_config_path=swarp_config_path,
include_scamp=True,
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