Update to Superset version 3.1.0

We update the build process so as to build from the upstream superset source, rather than just installing packages from pypi. Add the superset[trino,hive,postgresql,spark] extras in order to generate a more complete set of dependencies. In addition to this, we have temporarily applied the patch to fix this issue: apache/superset#25636 Bug: T335356 Change-Id: I9a47ae07a106a1481fdffe03f670ced4c46b262d
wikimedia · Jan 24, 2024 · 580b45a · 580b45a
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diff --git a/.gitignore b/.gitignore
@@ -1,2 +1,3 @@
 virtualenv
 venv
+superset_upstream
diff --git a/...ts/bullseye/Babel-2.11.0-py3-none-any.whl → ...bullseye/Babel-2.9.1-py2.py3-none-any.whl b/...ts/bullseye/Babel-2.11.0-py3-none-any.whl → ...bullseye/Babel-2.9.1-py2.py3-none-any.whl
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diff --git a/artifacts/bullseye/xlrd-2.0.1-py2.py3-none-any.whl b/artifacts/bullseye/xlrd-2.0.1-py2.py3-none-any.whl
diff --git a/artifacts/bullseye/yarl-1.8.2-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl b/artifacts/bullseye/yarl-1.8.2-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl
diff --git a/artifacts/bullseye/zipp-3.12.0-py3-none-any.whl b/artifacts/bullseye/zipp-3.12.0-py3-none-any.whl
diff --git a/artifacts/bullseye/zipp-3.15.0-py3-none-any.whl b/artifacts/bullseye/zipp-3.15.0-py3-none-any.whl
diff --git a/artifacts/bullseye/zope.event-4.6-py2.py3-none-any.whl b/artifacts/bullseye/zope.event-4.6-py2.py3-none-any.whl
diff --git a/artifacts/bullseye/zope.event-5.0-py3-none-any.whl b/artifacts/bullseye/zope.event-5.0-py3-none-any.whl
diff --git a/...p39-manylinux_2_5_x86_64.manylinux1_x86_64.manylinux_2_12_x86_64.manylinux2010_x86_64.whl b/...p39-manylinux_2_5_x86_64.manylinux1_x86_64.manylinux_2_12_x86_64.manylinux2010_x86_64.whl
diff --git a/...p39-manylinux_2_5_x86_64.manylinux1_x86_64.manylinux_2_17_x86_64.manylinux2014_x86_64.whl b/...p39-manylinux_2_5_x86_64.manylinux1_x86_64.manylinux_2_17_x86_64.manylinux2014_x86_64.whl
diff --git a/build_frontend.sh b/build_frontend.sh
@@ -6,13 +6,13 @@ set -ex
 apt-get update
 apt-get install -y curl ca-certificates gpg
 
-# Taken from https://deb.nodesource.com/setup_14.x
+# Taken from https://deb.nodesource.com/setup_16.x
 keyring='/usr/share/keyrings'
 node_key_url='https://deb.nodesource.com/gpgkey/nodesource.gpg.key'
 local_node_key="$keyring/nodesource.gpg"
 curl -s $node_key_url | gpg --dearmor | tee $local_node_key >/dev/null
-echo "deb [signed-by=$local_node_key] https://deb.nodesource.com/node_14.x buster main" > /etc/apt/sources.list.d/nodesource.list
-echo "deb-src [signed-by=$local_node_key] https://deb.nodesource.com/node_14.x buster main" >> /etc/apt/sources.list.d/nodesource.list
+echo "deb [signed-by=$local_node_key] https://deb.nodesource.com/node_16.x bullseye main" > /etc/apt/sources.list.d/nodesource.list
+echo "deb-src [signed-by=$local_node_key] https://deb.nodesource.com/node_16.x bullseye main" >> /etc/apt/sources.list.d/nodesource.list
 
 apt-get update
 apt-get install -y nodejs

diff --git a/build_wheels.sh b/build_wheels.sh
@@ -5,6 +5,8 @@
 
 set -ex
 
+export SUPERSET_VERSION=3.1.0
+
 # source common variables
 source $(dirname $0)/profile.sh
 
@@ -20,12 +22,13 @@ sudo apt-get --yes install \
   libffi-dev \
   libsasl2-dev \
   libldap2-dev \
-  default-libmysqlclient-dev
+  default-libmysqlclient-dev \
+  pkg-config
 
 # This will be set to the mtime of frozen-requirements.txt
 # This makes it more likely that wheels built with the same versions
 # will be byte for byte identical.
-export SOURCE_DATE_EPOCH=$(stat -c %Y ${deploy_dir}/frozen-requirements.txt)
+export SOURCE_DATE_EPOCH=$(stat -c %Y /superset_upstream/requirements/base.txt)
 
 # Build in a virtualenv, but install wheel files to $wheels_dir.
 build_venv=/tmp/superset-build-venv-${SOURCE_DATE_EPOCH}
@@ -37,8 +40,10 @@ test -e $build_venv && rm -rf $build_venv
 rm -rf $wheels_dir
 mkdir -p $wheels_dir
 
+cd /superset_deploy/superset_upstream
+
 # Update pip to be able to install the manylinux2010 and later wheel format.
-$build_venv/bin/pip install --upgrade pip==22.3.1
+$build_venv/bin/pip install --upgrade pip==23.2.1
 # Package pip itself as a wheel, so that pip can install the new wheels upon deployment
-$build_venv/bin/pip wheel -w $wheels_dir pip==22.3.1
-$build_venv/bin/pip wheel --trusted-host pypi.org --trusted-host files.pythonhosted.org -w $wheels_dir -r $deploy_dir/$requirements_file
+$build_venv/bin/pip wheel -w ../$wheels_dir pip==23.2.1
+$build_venv/bin/pip wheel --trusted-host pypi.org --trusted-host files.pythonhosted.org -w ../$wheels_dir -r requirements/base.txt -r /superset_deploy/$requirements_file
diff --git a/create_virtualenv.sh b/create_virtualenv.sh
@@ -18,6 +18,6 @@ virtualenv --python python3 --never-download $venv
 # Instead, just install all wheels in the wheels dir.
 
 # First upgrade pip to pip-22 so that newer wheels will be supported
-$venv/bin/pip install --no-index --find-links $wheels_dir $wheels_dir/pip-22.3.1-py3-none-any.whl
+$venv/bin/pip install --no-index --force-reinstall --find-links $wheels_dir $wheels_dir/pip-23.2.1-py3-none-any.whl
 
 $venv/bin/pip install --no-deps --no-index --find-links $wheels_dir $wheels_dir/*.whl
diff --git a/frozen-requirements.txt b/frozen-requirements.txt
@@ -1,16 +1,4 @@
-pyhive[kerberos,presto]==0.6.2
+pyhive[kerberos,presto]==0.7.0
 gunicorn[gevent]
-apache-superset[presto,mysql,druid]==1.5.3
+apache-superset[hive,presto,mysql,druid,trino,spark,postgres]
 pylibmc==1.6.1
-trino
-
-# Pinning markupsafe because of this issue:
-# https://github.com/pallets/markupsafe/issues/282
-# If superset upgrades flask or jinja, it may become unnecessary.
-markupsafe==2.0.1
-
-# Pinning importlib-metadata because of issues with version 5.0 and above
-importlib-metadata==4.13.0
-
-# Pinning cryptography because of issues with version 39.0.0 and above
-cryptography==38.0.4
diff --git a/prep_env_for_docker.sh b/prep_env_for_docker.sh
@@ -4,6 +4,29 @@
 
 set -xe
 
+export SUPERSET_VERSION=3.1.0
+
 apt-get update
 apt-get upgrade -y
-apt-get install -y sudo lsb-release libkrb5-dev libmemcached-dev
+apt-get install -y sudo lsb-release libkrb5-dev libmemcached-dev git ca-certificates curl
+
+# n.b The following source download and verify is disabled because the checksums are currently wrong - See: https://github.com/apache/superset/issues/25333
+# Download the superset source from Apache's repository and verify its authenticity
+# curl --remote-name-all https://downloads.apache.org/superset/${SUPERSET_VERSION}/apache-superset-${SUPERSET_VERSION}-source.tar.gz
+# curl --remote-name-all https://downloads.apache.org/superset/${SUPERSET_VERSION}/apache-superset-${SUPERSET_VERSION}-source.tar.gz.{asc,sha512}
+# curl https://downloads.apache.org/superset/KEYS | gpg --import &&
+#        gpg --verify apache-superset-${SUPERSET_VERSION}-source.tar.gz.asc
+# cat apache-superset-${SUPERSET_VERSION}-source.tar.gz.sha512 | sha512sum --check --strict
+# Extract the superset source
+#tar xzvf apache-superset-${SUPERSET_VERSION}-source.tar.gz
+cd /superset_deploy
+
+git config --global --add safe.directory /superset_deploy
+
+git clone --branch ${SUPERSET_VERSION} --single-branch https://github.com/apache/superset.git superset_upstream ||
+( cd superset_upstream; git checkout ${SUPERSET_VERSION} )
+
+# The following is a temporary workaround for the issues identifed in https://phabricator.wikimedia.org/T335356#9478404
+# It can be removed as soon as https://github.com/apache/superset/pull/26782 is approved by the upstream project and released.
+cd /superset_deploy/superset_upstream
+curl https://github.com/brouberol/superset/commit/6cab1dcd13f0466f86e3e5139e7e3e0cbe5e58ae.patch | git apply -v --index