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BA11E Sequence a Peptide #91

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weka511 opened this issue Dec 11, 2020 · 1 comment
Closed

BA11E Sequence a Peptide #91

weka511 opened this issue Dec 11, 2020 · 1 comment
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weka511 commented Dec 11, 2020

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@weka511 weka511 self-assigned this Dec 11, 2020
weka511 added a commit that referenced this issue Dec 29, 2020
@weka511
#91 started BA9R Construct a Suffix Tree from a Suffix Array
b7215d8
weka511 added a commit that referenced this issue Dec 29, 2020
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#91 WIP
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weka511 added a commit that referenced this issue Dec 29, 2020
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#91 Passed sample test (rough code)
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weka511 added a commit that referenced this issue Dec 29, 2020
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#91 Fails Extra and Rosalind
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weka511 added a commit that referenced this issue Dec 29, 2020
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#91 Fails Extra and Rosalind
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weka511 added a commit that referenced this issue Dec 29, 2020
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#91 Added Debug
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weka511 added a commit that referenced this issue Dec 29, 2020
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#91 Dolder i=0 into general case
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weka511 added a commit that referenced this issue Dec 29, 2020
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#91 Dolder i=0 into general case
d2274af
weka511 added a commit that referenced this issue Dec 29, 2020
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#91 Record differences in --extra
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weka511 added a commit that referenced this issue Dec 30, 2020
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#91 Added debugging code
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weka511 added a commit that referenced this issue Dec 30, 2020
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#91 Simplified calcylation of descent
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weka511 added a commit that referenced this issue Dec 30, 2020
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#91 Added doco. Recorded index in leaves.
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weka511 added a commit that referenced this issue Dec 31, 2020
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#91 Passes panamabananas$ test
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@weka511 weka511 removed their assignment Jan 25, 2021
weka511 added a commit that referenced this issue Apr 27, 2024
@weka511
#91 Converted project to Wing IDE 10.0.0.1
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weka511 added a commit that referenced this issue Apr 27, 2024
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Created stub and test for #91
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weka511 added a commit that referenced this issue Apr 28, 2024
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#91 Added fake amino acids for testing
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weka511 added a commit that referenced this issue Apr 28, 2024
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#91 Build DAG
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weka511 added a commit that referenced this issue Apr 28, 2024
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#91 Added doco
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weka511 added a commit that referenced this issue Apr 28, 2024
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#91 Added doco
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weka511 added a commit that referenced this issue Apr 28, 2024
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#91 Simplified function invert
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weka511 added a commit that referenced this issue Apr 29, 2024
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#91 Added test for BA11D Convert a Peptide Vector into a Peptide
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weka511 added a commit that referenced this issue Apr 29, 2024
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#91 Doco
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weka511 added a commit that referenced this issue Apr 29, 2024
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#91 link Nodes correctly
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weka511 added a commit that referenced this issue Apr 29, 2024
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#91 Moved create_inverse_masses
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weka511 added a commit that referenced this issue Apr 30, 2024
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#91 Doco changes
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weka511 added a commit that referenced this issue Apr 30, 2024
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#91 Refactored
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weka511 added a commit that referenced this issue May 1, 2024
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#91 Deleted unused code
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weka511 added a commit that referenced this issue May 1, 2024
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#91 Doco changes while exploring code
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weka511 added a commit that referenced this issue May 1, 2024
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#91 Doco changes while exploring code
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weka511 added a commit that referenced this issue May 4, 2024
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#91 Produce sparse DAG
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weka511 added a commit that referenced this issue May 4, 2024
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#91 Added back links
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weka511 added a commit that referenced this issue May 6, 2024
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#91 Sample test passes
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weka511 added a commit that referenced this issue May 6, 2024
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#91 Refactored
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weka511 added a commit that referenced this issue May 6, 2024
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#91 Moved code back to spectrum.py; unit test passes
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weka511 commented May 6, 2024

At this point sample passes (included in unit test), but not extra or actual rosalind tests.

weka511 added a commit that referenced this issue May 6, 2024
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#91 Passes --extra
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@weka511 weka511 closed this as completed in e52ea4d May 6, 2024
weka511 added a commit that referenced this issue May 6, 2024
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Doco for #91
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weka511 added a commit that referenced this issue May 6, 2024
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Doco for #91
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weka511 added a commit that referenced this issue May 6, 2024
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Removed unused imports #91
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