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Eliminate computational instability in the datm_cdeps_mx025_cfsr test…
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… on gaea, orion and wcoss_dell_p3 (#642)

* Eliminate computational instability in the datm_cdeps_mx025_cfsr test on Gaea, Orion and WCOSS_dell_p3.
* Use the latest develop branch of CDEPS.
* Reduce the forecast time to 12 hours for the "datm_cdeps_mx025_cfsr" and "datm_cdeps_mx025_gefs" tests, so that the two tests can be done within 30 minutes.
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@binli2337
binli2337 authored Jul 7, 2021
1 parent a842d57 commit b64e648
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Showing 23 changed files with 2,769 additions and 2,412 deletions.
2 changes: 1 addition & 1 deletion CDEPS-interface/CDEPS
Submodule CDEPS updated 9 files
+2 −1 CMakeLists.txt
+18 −5 datm/atm_comp_nuopc.F90
+23 −1 datm/datm_datamode_jra_mod.F90
+17 −5 dice/ice_comp_nuopc.F90
+15 −3 dlnd/lnd_comp_nuopc.F90
+16 −4 docn/ocn_comp_nuopc.F90
+17 −4 drof/rof_comp_nuopc.F90
+15 −3 dwav/wav_comp_nuopc.F90
+0 −1 streams/dshr_strdata_mod.F90
129 changes: 59 additions & 70 deletions CDEPS-interface/CMakeLists.txt
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Original file line number Diff line number Diff line change
Expand Up @@ -16,103 +16,92 @@ endif()
include("cdeps_files.cmake")

# CDEPS/share
add_library(share STATIC ${cdeps_share_files} ${ufs_cdeps_share_files})
add_library(cdeps::share ALIAS share)
add_library(share OBJECT ${cdeps_share_files} ${ufs_cdeps_share_files})
set_target_properties(share PROPERTIES Fortran_MODULE_DIRECTORY ${CMAKE_CURRENT_BINARY_DIR}/mod)
target_include_directories(share PRIVATE ${CMAKE_CURRENT_SOURCE_DIR}/ufs/cdeps_share)
target_include_directories(share PUBLIC $<BUILD_INTERFACE:${CMAKE_CURRENT_BINARY_DIR}/mod>
$<INSTALL_INTERFACE:mod>)
target_link_libraries(share PUBLIC esmf)
list(APPEND LIB_TARGETS share)
target_include_directories(share PRIVATE $<BUILD_INTERFACE:${CMAKE_CURRENT_BINARY_DIR}/mod>)
target_link_libraries(share PRIVATE esmf)

# CDEPS/streams
add_library(streams STATIC ${cdeps_streams_files})
add_library(cdeps::streams ALIAS streams)
add_dependencies(streams cdeps::share)
add_library(streams OBJECT ${cdeps_streams_files})
add_dependencies(streams share)
set_target_properties(streams PROPERTIES Fortran_MODULE_DIRECTORY ${CMAKE_CURRENT_BINARY_DIR}/mod)
target_include_directories(streams PUBLIC $<BUILD_INTERFACE:${CMAKE_CURRENT_BINARY_DIR}/mod>
$<INSTALL_INTERFACE:mod>)
target_include_directories(streams PRIVATE $<BUILD_INTERFACE:${CMAKE_CURRENT_BINARY_DIR}/mod>)
target_compile_definitions(streams PUBLIC "DISABLE_FoX")
target_link_libraries(streams PUBLIC cdeps::share)
target_link_libraries(streams PUBLIC esmf PIO::PIO_Fortran)
list(APPEND LIB_TARGETS streams)
target_link_libraries(streams PRIVATE share)
target_link_libraries(streams PRIVATE esmf PIO::PIO_Fortran)

# CDEPS/dshr
add_library(dshr STATIC ${cdeps_dshr_files})
add_library(cdeps::dshr ALIAS dshr)
add_dependencies(dshr cdeps::share cdeps::streams)
add_library(dshr OBJECT ${cdeps_dshr_files})
add_dependencies(dshr share streams)
set_target_properties(dshr PROPERTIES Fortran_MODULE_DIRECTORY ${CMAKE_CURRENT_BINARY_DIR}/mod)
target_include_directories(dshr PUBLIC $<BUILD_INTERFACE:${CMAKE_CURRENT_BINARY_DIR}/mod>
$<INSTALL_INTERFACE:mod>)
target_link_libraries(dshr PUBLIC cdeps::share cdeps::streams)
target_link_libraries(dshr PUBLIC esmf PIO::PIO_Fortran)
list(APPEND LIB_TARGETS dshr)
target_include_directories(dshr PRIVATE $<BUILD_INTERFACE:${CMAKE_CURRENT_BINARY_DIR}/mod>)
target_link_libraries(dshr PRIVATE share streams)
target_link_libraries(dshr PRIVATE esmf PIO::PIO_Fortran)

# CDEPS/datm
add_library(datm STATIC ${cdeps_datm_files})
add_library(cdeps::datm ALIAS datm)
add_dependencies(datm cdeps::share cdeps::streams cdeps::dshr)
add_library(datm OBJECT ${cdeps_datm_files})
add_dependencies(datm share streams dshr)
set_target_properties(datm PROPERTIES Fortran_MODULE_DIRECTORY ${CMAKE_CURRENT_BINARY_DIR}/mod)
target_include_directories(datm PUBLIC $<BUILD_INTERFACE:${CMAKE_CURRENT_BINARY_DIR}/mod>
$<INSTALL_INTERFACE:mod>)
target_link_libraries(datm PUBLIC cdeps::dshr cdeps::share cdeps::streams)
target_link_libraries(datm PUBLIC esmf PIO::PIO_Fortran)
list(APPEND LIB_TARGETS datm)
target_include_directories(datm PRIVATE $<BUILD_INTERFACE:${CMAKE_CURRENT_BINARY_DIR}/mod>)
target_link_libraries(datm PRIVATE dshr share streams)
target_link_libraries(datm PRIVATE esmf PIO::PIO_Fortran)

# CDEPS/dice
add_library(dice STATIC ${cdeps_dice_files})
add_library(cdeps::dice ALIAS dice)
add_dependencies(dice cdeps::share cdeps::streams cdeps::dshr)
add_library(dice OBJECT ${cdeps_dice_files})
add_dependencies(dice share streams dshr)
set_target_properties(dice PROPERTIES Fortran_MODULE_DIRECTORY ${CMAKE_CURRENT_BINARY_DIR}/mod)
target_include_directories(dice PUBLIC $<BUILD_INTERFACE:${CMAKE_CURRENT_BINARY_DIR}/mod>
$<INSTALL_INTERFACE:mod>)
target_link_libraries(dice PUBLIC cdeps::dshr cdeps::share cdeps::streams)
target_link_libraries(dice PUBLIC esmf)
list(APPEND LIB_TARGETS dice)
target_include_directories(dice PRIVATE $<BUILD_INTERFACE:${CMAKE_CURRENT_BINARY_DIR}/mod>)
target_link_libraries(dice PRIVATE dshr share streams)
target_link_libraries(dice PRIVATE esmf)

# CDEPS/dlnd
add_library(dlnd STATIC ${cdeps_dlnd_files})
add_library(cdeps::dlnd ALIAS dlnd)
add_dependencies(dlnd cdeps::share cdeps::streams cdeps::dshr)
add_library(dlnd OBJECT ${cdeps_dlnd_files})
add_dependencies(dlnd share streams dshr)
set_target_properties(dlnd PROPERTIES Fortran_MODULE_DIRECTORY ${CMAKE_CURRENT_BINARY_DIR}/mod)
target_include_directories(dlnd PUBLIC $<BUILD_INTERFACE:${CMAKE_CURRENT_BINARY_DIR}/mod>
$<INSTALL_INTERFACE:mod>)
target_link_libraries(dlnd PUBLIC cdeps::dshr cdeps::share cdeps::streams)
target_link_libraries(dlnd PUBLIC esmf)
list(APPEND LIB_TARGETS dlnd)
target_include_directories(dlnd PRIVATE $<BUILD_INTERFACE:${CMAKE_CURRENT_BINARY_DIR}/mod>)
target_link_libraries(dlnd PRIVATE dshr share streams)
target_link_libraries(dlnd PRIVATE esmf)

# CDEPS/docn
add_library(docn STATIC ${cdeps_docn_files})
add_library(cdeps::docn ALIAS docn)
add_dependencies(docn cdeps::share cdeps::streams cdeps::dshr)
add_library(docn OBJECT ${cdeps_docn_files})
add_dependencies(docn share streams dshr)
set_target_properties(docn PROPERTIES Fortran_MODULE_DIRECTORY ${CMAKE_CURRENT_BINARY_DIR}/mod)
target_include_directories(docn PUBLIC $<BUILD_INTERFACE:${CMAKE_CURRENT_BINARY_DIR}/mod>
$<INSTALL_INTERFACE:mod>)
target_link_libraries(docn PUBLIC cdeps::dshr cdeps::share cdeps::streams)
target_link_libraries(docn PUBLIC esmf)
list(APPEND LIB_TARGETS docn)
target_include_directories(docn PRIVATE $<BUILD_INTERFACE:${CMAKE_CURRENT_BINARY_DIR}/mod>)
target_link_libraries(docn PRIVATE dshr share streams)
target_link_libraries(docn PRIVATE esmf)

# CDEPS/drof
add_library(drof STATIC ${cdeps_drof_files})
add_library(cdeps::drof ALIAS drof)
add_dependencies(drof cdeps::share cdeps::streams cdeps::dshr)
add_library(drof OBJECT ${cdeps_drof_files})
add_dependencies(drof share streams dshr)
set_target_properties(drof PROPERTIES Fortran_MODULE_DIRECTORY ${CMAKE_CURRENT_BINARY_DIR}/mod)
target_include_directories(drof PUBLIC $<BUILD_INTERFACE:${CMAKE_CURRENT_BINARY_DIR}/mod>
$<INSTALL_INTERFACE:mod>)
target_link_libraries(drof PUBLIC cdeps::dshr cdeps::share cdeps::streams)
target_link_libraries(drof PUBLIC esmf)
list(APPEND LIB_TARGETS drof)
target_include_directories(drof PRIVATE $<BUILD_INTERFACE:${CMAKE_CURRENT_BINARY_DIR}/mod>)
target_link_libraries(drof PRIVATE dshr share streams)
target_link_libraries(drof PRIVATE esmf)

# CDEPS/dwav
add_library(dwav STATIC ${cdeps_dwav_files})
add_library(cdeps::dwav ALIAS dwav)
add_dependencies(dwav cdeps::share cdeps::streams cdeps::dshr)
add_library(dwav OBJECT ${cdeps_dwav_files})
add_dependencies(dwav share streams dshr)
set_target_properties(dwav PROPERTIES Fortran_MODULE_DIRECTORY ${CMAKE_CURRENT_BINARY_DIR}/mod)
target_include_directories(dwav PUBLIC $<BUILD_INTERFACE:${CMAKE_CURRENT_BINARY_DIR}/mod>
$<INSTALL_INTERFACE:mod>)
target_link_libraries(dwav PUBLIC cdeps::dshr cdeps::share cdeps::streams)
target_link_libraries(dwav PUBLIC esmf)
list(APPEND LIB_TARGETS dwav)
target_include_directories(dwav PRIVATE $<BUILD_INTERFACE:${CMAKE_CURRENT_BINARY_DIR}/mod>)
target_link_libraries(dwav PRIVATE dshr share streams)
target_link_libraries(dwav PRIVATE esmf)

# CDEPS
add_library(cdeps STATIC $<TARGET_OBJECTS:share>
$<TARGET_OBJECTS:streams>
$<TARGET_OBJECTS:dshr>
$<TARGET_OBJECTS:datm>
$<TARGET_OBJECTS:dice>
$<TARGET_OBJECTS:dlnd>
$<TARGET_OBJECTS:docn>
$<TARGET_OBJECTS:drof>
$<TARGET_OBJECTS:dwav>)
add_library(cdeps::cdeps ALIAS cdeps)
target_include_directories(cdeps PUBLIC $<BUILD_INTERFACE:${CMAKE_CURRENT_BINARY_DIR}/mod>
$<INSTALL_INTERFACE:mod>)
target_link_libraries(cdeps PUBLIC esmf PIO::PIO_Fortran)
list(APPEND LIB_TARGETS cdeps)

###############################################################################
### Install
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8 changes: 3 additions & 5 deletions CMakeLists.txt
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Original file line number Diff line number Diff line change
Expand Up @@ -291,11 +291,9 @@ if(CMEPS)
endif()

if(CDEPS)
add_dependencies(ufs cdeps::datm)
list(APPEND _ufs_defs_private CDEPS-interface/CDEPS
FRONT_CDEPS_DATM=atm_comp_nuopc)
include_directories(${CMAKE_CURRENT_BINARY_DIR}/CDEPS-interface/CDEPS/datm)
target_link_libraries(ufs PUBLIC cdeps::datm)
add_dependencies(ufs cdeps::cdeps)
list(APPEND _ufs_defs_private FRONT_CDEPS_DATM=cdeps_datm_comp)
target_link_libraries(ufs PUBLIC cdeps::cdeps)
endif()

target_compile_definitions(ufs PRIVATE "${_ufs_defs_private}")
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1 change: 0 additions & 1 deletion build.sh
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Original file line number Diff line number Diff line change
Expand Up @@ -16,7 +16,6 @@ export ESMFMKFILE=${ESMFMKFILE:?"Please set ESMFMKFILE environment variable"}
BUILD_DIR=${BUILD_DIR:-${UFS_MODEL_DIR}/build}
mkdir -p ${BUILD_DIR}

[[ -n "${CCPP_SUITES:-""}" ]] && CMAKE_FLAGS+=" -DCCPP_SUITES=${CCPP_SUITES}"
[[ -n "${MAPL_ROOT:-""}" ]] && CMAKE_FLAGS+=" -DCMAKE_MODULE_PATH=${MAPL_ROOT}/share/MAPL/cmake"

cd ${BUILD_DIR}
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