Incorporate Graduate Student Test (GST) into config.community.sh (#344)

## DESCRIPTION OF CHANGES: 
* Modify config.community.sh to be very similar to the one in the release branch, which is being used for the Graduate Student Test (GST).
* Add the GST as another WE2E test.  It is called GST_release_public_v1.
* Modify the WE2E testing script (run_experiments.sh) so that it can handle both nemsio and grib2 format files from FV3GFS and GSMGFS.  This is needed for the GST test because that uses grib2 files.
* Add new file (testlist.release_public_v1.txt) containing a minimal list of WE2E tests that should be run for PRs to make sure that release features aren't broken.

## TESTS CONDUCTED: 
On Hera, ran the new WE2E test **GST_release_public_v1** as well as **grid_RRFS_CONUS_25km_ics_FV3GFS_lbcs_FV3GFS_suite_GFS_v15p2**.  Both succeeded.

## CONTRIBUTORS (optional): 
@jwolff-ncar

tests/baseline_configs/config.GST_release_public_v1.sh

@@ -0,0 +1,23 @@
+RUN_ENVIR="community"
+PREEXISTING_DIR_METHOD="rename"
+
+PREDEF_GRID_NAME="RRFS_CONUS_25km"
+GRID_GEN_METHOD="ESGgrid"
+QUILTING="TRUE"
+
+CCPP_PHYS_SUITE="FV3_GFS_v15p2"
+FCST_LEN_HRS="48"
+LBC_SPEC_INTVL_HRS="6"
+
+DATE_FIRST_CYCL="20190615"
+DATE_LAST_CYCL="20190615"
+CYCL_HRS=( "00" )
+
+EXTRN_MDL_NAME_ICS="FV3GFS"
+EXTRN_MDL_NAME_LBCS="FV3GFS"
+USE_USER_STAGED_EXTRN_FILES="TRUE"
+
+FV3GFS_FILE_FMT_ICS="grib2"
+FV3GFS_FILE_FMT_LBCS="grib2"
+
+WTIME_RUN_FCST="01:00:00"

tests/baselines_list.txt

@@ -1,4 +1,5 @@
 DOT_OR_USCORE
+GST_release_public_v1
 community_ensemble_008mems
 community_ensemble_2mems
 get_extrn_files_from_hpss_FV3GFS_FV3GFS

tests/run_experiments.sh

@@ -719,7 +719,11 @@ machine (MACHINE):
     EXTRN_MDL_SOURCE_BASEDIR_ICS="${extrn_mdl_source_basedir}/${EXTRN_MDL_NAME_ICS}"
     if [ "${EXTRN_MDL_NAME_ICS}" = "FV3GFS" ] || \
        [ "${EXTRN_MDL_NAME_ICS}" = "GSMGFS" ]; then
-      EXTRN_MDL_FILES_ICS=( "gfs.atmanl.nemsio" "gfs.sfcanl.nemsio" )
+      if [ "${FV3GFS_FILE_FMT_ICS}" = "nemsio" ]; then
+        EXTRN_MDL_FILES_ICS=( "gfs.atmanl.nemsio" "gfs.sfcanl.nemsio" )
+      elif [ "${FV3GFS_FILE_FMT_ICS}" = "grib2" ]; then
+        EXTRN_MDL_FILES_ICS=( "gfs.pgrb2.0p25.f000" )
+      fi
     elif [ "${EXTRN_MDL_NAME_ICS}" = "HRRR" ] || \
          [ "${EXTRN_MDL_NAME_ICS}" = "RAP" ]; then
       EXTRN_MDL_FILES_ICS=( "${EXTRN_MDL_NAME_ICS,,}.out.for_f000" )
@@ -744,8 +748,12 @@ boundary conditions specification interval (LBC_SPEC_INTVL_HRS):
     EXTRN_MDL_FILES_LBCS=( $( printf "%03d " "${lbc_spec_times_hrs[@]}" ) ) 
     if [ "${EXTRN_MDL_NAME_LBCS}" = "FV3GFS" ] || \
        [ "${EXTRN_MDL_NAME_LBCS}" = "GSMGFS" ]; then
-      EXTRN_MDL_FILES_LBCS=( "${EXTRN_MDL_FILES_LBCS[@]/#/gfs.atmf}" )
-      EXTRN_MDL_FILES_LBCS=( "${EXTRN_MDL_FILES_LBCS[@]/%/.nemsio}" )
+      if [ "${FV3GFS_FILE_FMT_ICS}" = "nemsio" ]; then
+        EXTRN_MDL_FILES_LBCS=( "${EXTRN_MDL_FILES_LBCS[@]/#/gfs.atmf}" )
+        EXTRN_MDL_FILES_LBCS=( "${EXTRN_MDL_FILES_LBCS[@]/%/.nemsio}" )
+      elif [ "${FV3GFS_FILE_FMT_ICS}" = "grib2" ]; then
+        EXTRN_MDL_FILES_LBCS=( "${EXTRN_MDL_FILES_LBCS[@]/#/gfs.pgrb2.0p25.f}" )
+      fi
     elif [ "${EXTRN_MDL_NAME_LBCS}" = "HRRR" ] || \
          [ "${EXTRN_MDL_NAME_LBCS}" = "RAP" ]; then
       EXTRN_MDL_FILES_LBCS=( "${EXTRN_MDL_FILES_LBCS[@]/#/${EXTRN_MDL_NAME_LBCS,,}.out.for_f}" )

tests/testlist.release_public_v1.txt

@@ -0,0 +1,7 @@
+GST_release_public_v1
+grid_RRFS_CONUS_13km_ics_FV3GFS_lbcs_FV3GFS_suite_GFS_v15p2
+grid_RRFS_CONUS_13km_ics_HRRR_lbcs_RAP_suite_RRFS_v1beta
+grid_RRFS_CONUS_25km_ics_FV3GFS_lbcs_FV3GFS_suite_GFS_v15p2
+grid_RRFS_CONUS_25km_ics_HRRR_lbcs_RAP_suite_RRFS_v1beta
+grid_RRFS_CONUS_3km_ics_FV3GFS_lbcs_FV3GFS_suite_GFS_v15p2
+grid_RRFS_CONUS_3km_ics_HRRR_lbcs_RAP_suite_RRFS_v1beta

ush/config.community.sh

@@ -10,17 +10,28 @@ PREEXISTING_DIR_METHOD="rename"
 PREDEF_GRID_NAME="RRFS_CONUS_25km"
 GRID_GEN_METHOD="ESGgrid"
 QUILTING="TRUE"
-CCPP_PHYS_SUITE="FV3_GFS_2017_gfdlmp"
-FCST_LEN_HRS="6"
+
+CCPP_PHYS_SUITE="FV3_GFS_v15p2"
+FCST_LEN_HRS="48"
 LBC_SPEC_INTVL_HRS="6"
 
-DATE_FIRST_CYCL="20190701"
-DATE_LAST_CYCL="20190701"
+DATE_FIRST_CYCL="20190615"
+DATE_LAST_CYCL="20190615"
 CYCL_HRS=( "00" )
 
 EXTRN_MDL_NAME_ICS="FV3GFS"
 EXTRN_MDL_NAME_LBCS="FV3GFS"
 
-RUN_TASK_MAKE_GRID="TRUE"
-RUN_TASK_MAKE_OROG="TRUE"
-RUN_TASK_MAKE_SFC_CLIMO="TRUE"
+FV3GFS_FILE_FMT_ICS="grib2"
+FV3GFS_FILE_FMT_LBCS="grib2"
+
+WTIME_RUN_FCST="01:00:00"
+
+# The following is specifically for Hera.  It will have to be modified
+# if on another platform, using other dates, other external models, etc.
+USE_USER_STAGED_EXTRN_FILES="TRUE"
+EXTRN_MDL_SOURCE_BASEDIR_ICS="/scratch2/BMC/det/UFS_SRW_app/v1p0/model_data/FV3GFS"
+EXTRN_MDL_FILES_ICS=( "gfs.pgrb2.0p25.f000" )
+EXTRN_MDL_SOURCE_BASEDIR_LBCS="/scratch2/BMC/det/UFS_SRW_app/v1p0/model_data/FV3GFS"
+EXTRN_MDL_FILES_LBCS=( "gfs.pgrb2.0p25.f006" "gfs.pgrb2.0p25.f012" "gfs.pgrb2.0p25.f018" "gfs.pgrb2.0p25.f024" \
+                       "gfs.pgrb2.0p25.f030" "gfs.pgrb2.0p25.f036" "gfs.pgrb2.0p25.f042" "gfs.pgrb2.0p25.f048" )