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Fix callVariant#891

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zhuchcn merged 8 commits intomainuclahs-cds/package-moPepGen:mainfrom czhu-fix-call-variantuclahs-cds/package-moPepGen:czhu-fix-call-variantCopy head branch name to clipboardFeb 12, 2025

+2,363-17

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Commits on Feb 11, 2025

• fix (callVariant): when aligning the variant bubble, any non-member node will not be further processed to look for in-bridge and out-bridges. Need to run more tests to make sure this will not break…

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• Merge remote-tracking branch 'origin/main' into czhu-fix-call-variant

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• fix (PVGNode): add id to TVGNode

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Commits on Feb 12, 2025

• test (callVariant): test case added

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• fix (callVariant): fixed issue that callVariant fails on transcripts with SEC very close to the start codon

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• doc (moPepGen): version bumped

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• fix: remove unused variable set for debugging

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• fix: test files added

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