Warning message from matplotlib

[lydiayliu]

I have no name!@ffc6ce33d83f:/$ moPepGen callAltTranslation \
>     --selenocysteine-termination \
>     --w2f-reassignment \
>     --index-dir /hot/project/method/AlgorithmDevelopment/ALGO-000074-moPepGen/ref/GRCh38-EBI-GENCODE34/index/ \
>     --output-path /hot/project/method/AlgorithmDevelopment/ALGO-000074-moPepGen/ref/GRCh38-EBI-GENCODE34/alt_translation/sect_w2f_default.fasta
Matplotlib created a temporary config/cache directory at /tmp/matplotlib-4pmdw9dn because the default path (/.config/matplotlib) is not a writable directory; it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.

[lydiayliu]

I'm still getting this, I think it is a little annoying and is something that we should clean up? @zhuchcn what do you think?

[zhuchcn]

Why this is anoying is because docker can be launched with different user names. This means the user's home directory is different and it's hard to figure out a shared "home" for all users. I googled before but didn't find any directly relavent answer. Maybe we can set it to /opt/matplotlib or /tmp/matplotlib I can give it a try

[lydiayliu]

Ahh that's why it's different every time. I launched using sbatch this time and this showed up in .err which is annoying (and i think will alarm users)

This is what it looked like this time

Digest: sha256:e8265ccf54c68e9306b1893ca7bb955bc8facfd053ceb565c238ee297a946539
Status: Downloaded newer image for ghcr.io/uclahs-cds/mopepgen:1.1.0
Matplotlib created a temporary config/cache directory at /tmp/matplotlib-q13z6mn_ because the default path (/.config/matplotlib) is not a writable directory; it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
Matplotlib created a temporary config/cache directory at /tmp/matplotlib-nty5zszx because the default path (/.config/matplotlib) is not a writable directory; it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.