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BDCat prod release 1675464515 #5691

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copying manifests/modsec/windows-powershell-commands.data to gen3.bio…
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copying portal/gitops-favicon.ico to gen3.biodatacatalyst.nhlbi.nih.gov
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copying portal/gitops.json to gen3.biodatacatalyst.nhlbi.nih.gov
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52 changes: 26 additions & 26 deletions gen3.biodatacatalyst.nhlbi.nih.gov/manifest.json
Original file line number Diff line number Diff line change
Expand Up @@ -7,30 +7,30 @@
"autodeploy": "yes"
},
"versions": {
"access-backend": "707767160287.dkr.ecr.us-east-1.amazonaws.com/gen3/access-backend:2022.11",
"arborist": "707767160287.dkr.ecr.us-east-1.amazonaws.com/gen3/arborist:2022.11",
"audit-service": "707767160287.dkr.ecr.us-east-1.amazonaws.com/gen3/audit-service:2022.11",
"awshelper": "707767160287.dkr.ecr.us-east-1.amazonaws.com/gen3/awshelper:2022.11",
"access-backend": "707767160287.dkr.ecr.us-east-1.amazonaws.com/gen3/access-backend:2023.02",
"arborist": "707767160287.dkr.ecr.us-east-1.amazonaws.com/gen3/arborist:2023.02",
"audit-service": "707767160287.dkr.ecr.us-east-1.amazonaws.com/gen3/audit-service:2023.02",
"awshelper": "707767160287.dkr.ecr.us-east-1.amazonaws.com/gen3/awshelper:2023.02",
"aws-es-proxy": "quay.io/cdis/aws-es-proxy:0.8",
"fence": "707767160287.dkr.ecr.us-east-1.amazonaws.com/gen3/fence:2022.11",
"indexd": "707767160287.dkr.ecr.us-east-1.amazonaws.com/gen3/indexd:2022.11",
"peregrine": "707767160287.dkr.ecr.us-east-1.amazonaws.com/gen3/peregrine:2022.11",
"pidgin": "707767160287.dkr.ecr.us-east-1.amazonaws.com/gen3/pidgin:2022.11",
"revproxy": "707767160287.dkr.ecr.us-east-1.amazonaws.com/gen3/nginx:2022.11",
"sheepdog": "707767160287.dkr.ecr.us-east-1.amazonaws.com/gen3/sheepdog:2022.11",
"metadata": "707767160287.dkr.ecr.us-east-1.amazonaws.com/gen3/metadata-service:2.1.0",
"portal": "707767160287.dkr.ecr.us-east-1.amazonaws.com/gen3/data-portal:2022.11",
"fence": "707767160287.dkr.ecr.us-east-1.amazonaws.com/gen3/fence:2023.02",
"indexd": "707767160287.dkr.ecr.us-east-1.amazonaws.com/gen3/indexd:2023.02",
"peregrine": "707767160287.dkr.ecr.us-east-1.amazonaws.com/gen3/peregrine:2023.02",
"pidgin": "707767160287.dkr.ecr.us-east-1.amazonaws.com/gen3/pidgin:2023.02",
"revproxy": "707767160287.dkr.ecr.us-east-1.amazonaws.com/gen3/nginx:2023.02",
"sheepdog": "707767160287.dkr.ecr.us-east-1.amazonaws.com/gen3/sheepdog:2023.02",
"metadata": "707767160287.dkr.ecr.us-east-1.amazonaws.com/gen3/metadata-service:2023.02",
"portal": "707767160287.dkr.ecr.us-east-1.amazonaws.com/gen3/data-portal:5.3.0",
"fluentd": "fluent/fluentd-kubernetes-daemonset:v1.2-debian-cloudwatch",
"spark": "707767160287.dkr.ecr.us-east-1.amazonaws.com/gen3/gen3-spark:2022.11",
"tube": "707767160287.dkr.ecr.us-east-1.amazonaws.com/gen3/tube:2022.11",
"guppy": "707767160287.dkr.ecr.us-east-1.amazonaws.com/gen3/guppy:2022.11",
"sower": "707767160287.dkr.ecr.us-east-1.amazonaws.com/gen3/sower:2022.11",
"hatchery": "707767160287.dkr.ecr.us-east-1.amazonaws.com/gen3/hatchery:2022.11",
"spark": "707767160287.dkr.ecr.us-east-1.amazonaws.com/gen3/gen3-spark:2023.02",
"tube": "707767160287.dkr.ecr.us-east-1.amazonaws.com/gen3/tube:2023.02",
"guppy": "707767160287.dkr.ecr.us-east-1.amazonaws.com/gen3/guppy:2023.02",
"sower": "707767160287.dkr.ecr.us-east-1.amazonaws.com/gen3/sower:2023.02",
"hatchery": "707767160287.dkr.ecr.us-east-1.amazonaws.com/gen3/hatchery:2023.02",
"ambassador": "quay.io/datawire/ambassador:1.4.2",
"wts": "707767160287.dkr.ecr.us-east-1.amazonaws.com/gen3/workspace-token-service:2022.11",
"manifestservice": "707767160287.dkr.ecr.us-east-1.amazonaws.com/gen3/manifestservice:2022.11",
"ssjdispatcher": "707767160287.dkr.ecr.us-east-1.amazonaws.com/gen3/ssjdispatcher:2022.11",
"dashboard": "707767160287.dkr.ecr.us-east-1.amazonaws.com/gen3/gen3-statics:2022.11"
"wts": "707767160287.dkr.ecr.us-east-1.amazonaws.com/gen3/workspace-token-service:2023.02",
"manifestservice": "707767160287.dkr.ecr.us-east-1.amazonaws.com/gen3/manifestservice:2023.02",
"ssjdispatcher": "707767160287.dkr.ecr.us-east-1.amazonaws.com/gen3/ssjdispatcher:2023.02",
"dashboard": "707767160287.dkr.ecr.us-east-1.amazonaws.com/gen3/gen3-statics:2023.02"
},
"google": {
"enabled": "yes"
Expand All @@ -40,7 +40,7 @@
},
"ssjdispatcher": {
"job_images": {
"indexing": "707767160287.dkr.ecr.us-east-1.amazonaws.com/gen3/indexs3client:2022.11"
"indexing": "707767160287.dkr.ecr.us-east-1.amazonaws.com/gen3/indexs3client:2023.02"
}
},
"arborist": {
Expand All @@ -52,7 +52,7 @@
"action": "export",
"container": {
"name": "job-task",
"image": "707767160287.dkr.ecr.us-east-1.amazonaws.com/gen3/pelican-export:2022.11",
"image": "707767160287.dkr.ecr.us-east-1.amazonaws.com/gen3/pelican-export:2023.02",
"pull_policy": "Always",
"env": [
{
Expand Down Expand Up @@ -116,7 +116,7 @@
"action": "export-files",
"container": {
"name": "job-task",
"image": "707767160287.dkr.ecr.us-east-1.amazonaws.com/gen3/pelican-export:2022.11",
"image": "707767160287.dkr.ecr.us-east-1.amazonaws.com/gen3/pelican-export:2023.02",
"pull_policy": "Always",
"env": [
{
Expand Down Expand Up @@ -218,9 +218,9 @@
"tier_access_limit": 50,
"dispatcher_job_num": "10",
"netpolicy": "on",
"dd_enabled": true,
"argocd": "true",
"waf_enabled": "true"
"waf_enabled": "true",
"dd_enabled": true
},
"canary": {
"default": 0
Expand Down
Original file line number Diff line number Diff line change
Expand Up @@ -5,7 +5,7 @@
"sidecar": {
"cpu-limit": "1.0",
"memory-limit": "256Mi",
"image": "707767160287.dkr.ecr.us-east-1.amazonaws.com/gen3/gen3fuse-sidecar:2022.11",
"image": "707767160287.dkr.ecr.us-east-1.amazonaws.com/gen3/gen3fuse-sidecar:2023.02",
"env": {
"NAMESPACE": "default",
"HOSTNAME": "gen3.biodatacatalyst.nhlbi.nih.gov"
Expand Down
24 changes: 8 additions & 16 deletions gen3.biodatacatalyst.nhlbi.nih.gov/portal/gitops.json
Original file line number Diff line number Diff line change
Expand Up @@ -49,7 +49,7 @@
{
"name": "Explore Data",
"icon": "stage-explore",
"body": "The Gen3 Exploration Page gives you insights and a clear overview under selected factors.",
"body": "The Exploration Page gives you insights and a clear overview under selected factors.",
"link": "/explorer",
"label": "Explore data"
},
Expand Down Expand Up @@ -286,23 +286,23 @@
{
"enabled": true,
"type": "export-pfb-to-url",
"targetURLTemplate": "https://cgc.sbgenomics.com/import/pfb?URL={{PRESIGNED_URL}}&source=bdc",
"targetURLTemplate": "https://cgc-staging.sbgenomics.com/import/pfb?URL={{PRESIGNED_URL}}&source=bdc",
"title": "Export to CGC",
"rightIcon": "external-link",
"dropdownId": "sevenBridges"
},
{
"enabled": true,
"type": "export-pfb-to-url",
"targetURLTemplate": "https://cavatica.sbgenomics.com/import/pfb?URL={{PRESIGNED_URL}}&source=bdc",
"targetURLTemplate": "https://cavatica-staging-vayu.sbgenomics.com/import/pfb?URL={{PRESIGNED_URL}}&source=bdc",
"title": "Export to CAVATICA",
"rightIcon": "external-link",
"dropdownId": "sevenBridges"
},
{
"enabled": true,
"type": "export-pfb-to-url",
"targetURLTemplate": "https://platform.sb.biodatacatalyst.nhlbi.nih.gov/import/pfb?URL={{PRESIGNED_URL}}&source=bdc",
"targetURLTemplate": "https://f4c-staging-vayu.sb.biodatacatalyst.nhlbi.nih.gov/import/pfb?URL={{PRESIGNED_URL}}&source=bdc",
"title": "Export to BDC (Seven Bridges)",
"rightIcon": "external-link",
"dropdownId": "sevenBridges"
Expand Down Expand Up @@ -579,23 +579,23 @@
{
"enabled": true,
"type": "export-file-pfb-to-url",
"targetURLTemplate": "https://cgc.sbgenomics.com/import/pfb?URL={{PRESIGNED_URL}}&source=bdc",
"targetURLTemplate": "https://cgc-staging.sbgenomics.com/import/pfb?URL={{PRESIGNED_URL}}&source=bdc",
"title": "Export to CGC",
"rightIcon": "external-link",
"dropdownId": "sevenBridges"
},
{
"enabled": true,
"type": "export-file-pfb-to-url",
"targetURLTemplate": "https://cavatica.sbgenomics.com/import/pfb?URL={{PRESIGNED_URL}}&source=bdc",
"targetURLTemplate": "https://cavatica-staging-vayu.sbgenomics.com/import/pfb?URL={{PRESIGNED_URL}}&source=bdc",
"title": "Export to CAVATICA",
"rightIcon": "external-link",
"dropdownId": "sevenBridges"
},
{
"enabled": true,
"type": "export-file-pfb-to-url",
"targetURLTemplate": "https://platform.sb.biodatacatalyst.nhlbi.nih.gov/import/pfb?URL={{PRESIGNED_URL}}&source=bdc",
"targetURLTemplate": "https://f4c-staging-vayu.sb.biodatacatalyst.nhlbi.nih.gov/import/pfb?URL={{PRESIGNED_URL}}&source=bdc",
"title": "Export to BDC (Seven Bridges)",
"rightIcon": "external-link",
"dropdownId": "sevenBridges"
Expand Down Expand Up @@ -664,19 +664,11 @@
"supportedValues": {
"accessible": {
"enabled": true,
"menuText": "Available"
"menuText": "Accessible"
},
"unaccessible": {
"enabled": true,
"menuText": "Not Accessible"
},
"pending": {
"enabled": true,
"menuText": "Pending"
},
"notAvailable": {
"enabled": true,
"menuText": "Not Available"
}
}
}
Expand Down