BDCat 2021.09 prod release 1632170741

[themarcelor]

copying files from preprod.gen3.biodatacatalyst.nhlbi.nih.gov to gen3.biodatacatalyst.nhlbi.nih.gov

[PlanXCyborg]

gen3.biodatacatalyst.nhlbi.nih.gov/manifest.json

Deployment changes

• awshelper
  • Remove USE_AGG_MDS and AGG_MDS_NAMESPACE from Gen3Secrets/g3auto/metadata/metadata.env and set those variables in a manifest: {} block in manifest.json (feat(metadata): use manifest to drive config cloud-automation#1701)
  • Migrate the appropriate agg MDS config to the relevant manifest repo under a metadata/aggregate_config.json path (feat(metadata): use manifest to drive config cloud-automation#1701)
  • Run gen3 kube-setup-metdata and roll the metadata service in Kubernetes (feat(metadata): use manifest to drive config cloud-automation#1701)
  • Add cronjobs to the manifest by making a cdis-manifest/(commons folder)/manifests/cronjobs/cronjobs.json file with each cron name being a key and the cron schedule being the value. (feat(cron-configuration): Added ability to configure cronjobs through… cloud-automation#1640)
• fence
  • Requires these cloud-automation updates to revproxy: (PXP-7565): Exclude Fence register-user blueprint from CSRF check cloud-automation#1580 ((PXP-7565): User registration, plus CSRF changes fence#906)
• portal
  • Requires loginForDownload flag set to true in gitops (PXP-8448 - Register users for download data-portal#912)
  • User registration before download feature depends on (PXP-7565): User registration, plus CSRF changes fence#906 (PXP-8448 - Register users for download data-portal#912)
  • Requires the configuration of the batch-export sower job: Batch export sower job sower-jobs#29 in the environment's manifest. This job also has its own setup in cloud automation: Feat/batch export cloud-automation#1708 (Add UI components and polling for zip downloads data-portal#906)
  • 2 new fields in gitops.json: discoveryconfig.features.exportToWorkspace.[enableDownloadZip (bool) downloadZipButtonText (string)] (Add UI components and polling for zip downloads data-portal#906)
  • Requires PXP-8364 Fix/portal csp cloud-automation#1687, otherwsie Indexing page may not work properly (PXP-8364 fix: strict csp data-portal#893)
  • Portal config field discoveryConfig.features.exportToWorkspaceBETA has been renamed to discoveryConfig.features.exportToWorkspace (HP-255 HEAL UI updates with adaptations to ecosystems UI data-portal#876)
  • Note that there are several other new configurations introduced for the Discovery page, please refer to this diff (HP-255 HEAL UI updates with adaptations to ecosystems UI data-portal#876)
  • New GEN3_BUNDLE option heal introduced for buliding a HEAL bundle (HP-255 HEAL UI updates with adaptations to ecosystems UI data-portal#876)