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Gen3 Monthly Release 2022.10 externaldata.healdata.org 1666716194 (#5298
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* apply version 2022.10 to externaldata.healdata.org

* Update manifest.json

* Update manifest.json

* Update manifest.json

Co-authored-by: Hara Prasad <haraprasadj@uchicago.edu>
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@PlanXCyborg @haraprasadj
PlanXCyborg and haraprasadj authored Oct 26, 2022
1 parent a77808f commit 4015ad8
Showing 1 changed file with 11 additions and 215 deletions.
226 changes: 11 additions & 215 deletions externaldata.healdata.org/manifest.json
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Original file line number Diff line number Diff line change
Expand Up @@ -7,225 +7,21 @@
"autodeploy": "yes"
},
"versions": {
"arborist": "707767160287.dkr.ecr.us-east-1.amazonaws.com/gen3/arborist:2022.06",
"audit-service": "707767160287.dkr.ecr.us-east-1.amazonaws.com/gen3/audit-service:2022.06",
"fence": "707767160287.dkr.ecr.us-east-1.amazonaws.com/gen3/fence:2022.06",
"arborist": "707767160287.dkr.ecr.us-east-1.amazonaws.com/gen3/arborist:2022.10",
"audit-service": "707767160287.dkr.ecr.us-east-1.amazonaws.com/gen3/audit-service:2022.10",
"fence": "707767160287.dkr.ecr.us-east-1.amazonaws.com/gen3/fence:2022.10",
"aws-es-proxy": "quay.io/cdis/aws-es-proxy:0.8",
"indexd": "707767160287.dkr.ecr.us-east-1.amazonaws.com/gen3/indexd:2022.06",
"manifestservice": "707767160287.dkr.ecr.us-east-1.amazonaws.com/gen3/manifestservice:2022.06",
"metadata": "707767160287.dkr.ecr.us-east-1.amazonaws.com/gen3/metadata-service:2022.06",
"peregrine": "707767160287.dkr.ecr.us-east-1.amazonaws.com/gen3/peregrine:2022.06",
"pidgin": "707767160287.dkr.ecr.us-east-1.amazonaws.com/gen3/pidgin:2022.06",
"revproxy": "707767160287.dkr.ecr.us-east-1.amazonaws.com/gen3/nginx:2022.06",
"sheepdog": "707767160287.dkr.ecr.us-east-1.amazonaws.com/gen3/sheepdog:2022.06",
"ssjdispatcher": "707767160287.dkr.ecr.us-east-1.amazonaws.com/gen3/ssjdispatcher:2022.06",
"sower": "707767160287.dkr.ecr.us-east-1.amazonaws.com/gen3/sower:2022.06",
"wts": "707767160287.dkr.ecr.us-east-1.amazonaws.com/gen3/workspace-token-service:2022.06"
"indexd": "707767160287.dkr.ecr.us-east-1.amazonaws.com/gen3/indexd:2022.10",
"manifestservice": "707767160287.dkr.ecr.us-east-1.amazonaws.com/gen3/manifestservice:2022.10",
"metadata": "707767160287.dkr.ecr.us-east-1.amazonaws.com/gen3/metadata-service:2022.10",
"peregrine": "707767160287.dkr.ecr.us-east-1.amazonaws.com/gen3/peregrine:2022.10",
"revproxy": "707767160287.dkr.ecr.us-east-1.amazonaws.com/gen3/nginx:2022.10",
"sheepdog": "707767160287.dkr.ecr.us-east-1.amazonaws.com/gen3/sheepdog:2022.10",
"pidgin": "707767160287.dkr.ecr.us-east-1.amazonaws.com/gen3/pidgin:2022.10"
},
"arborist": {
"deployment_version": "2"
},
"sower": [
{
"name": "ingest-metadata-manifest",
"action": "ingest-metadata-manifest",
"activeDeadlineSeconds": 86400,
"serviceAccountName": "jobs-externaldata-healdata-org",
"container": {
"name": "job-task",
"image": "707767160287.dkr.ecr.us-east-1.amazonaws.com/gen3/metadata-manifest-ingestion:2022.06",
"pull_policy": "Always",
"env": [
{
"name": "GEN3_HOSTNAME",
"valueFrom": {
"configMapKeyRef": {
"name": "manifest-global",
"key": "hostname"
}
}
}
],
"volumeMounts": [
{
"name": "creds-volume",
"readOnly": true,
"mountPath": "/creds.json",
"subPath": "creds.json"
}
],
"cpu-limit": "1",
"memory-limit": "1Gi"
},
"volumes": [
{
"name": "creds-volume",
"secret": {
"secretName": "sower-jobs-g3auto"
}
}
],
"restart_policy": "Never"
},
{
"name": "get-dbgap-metadata",
"action": "get-dbgap-metadata",
"serviceAccountName": "jobs-externaldata-healdata-org",
"container": {
"name": "job-task",
"image": "707767160287.dkr.ecr.us-east-1.amazonaws.com/gen3/get-dbgap-metadata:2022.06",
"pull_policy": "Always",
"env": [],
"volumeMounts": [
{
"name": "creds-volume",
"readOnly": true,
"mountPath": "/creds.json",
"subPath": "creds.json"
}
],
"cpu-limit": "1",
"memory-limit": "1Gi"
},
"volumes": [
{
"name": "creds-volume",
"secret": {
"secretName": "sower-jobs-g3auto"
}
}
],
"restart_policy": "Never"
},
{
"name": "manifest-indexing",
"action": "index-object-manifest",
"activeDeadlineSeconds": 86400,
"serviceAccountName": "jobs-externaldata-healdata-org",
"container": {
"name": "job-task",
"image": "707767160287.dkr.ecr.us-east-1.amazonaws.com/gen3/manifest-indexing:2022.06",
"pull_policy": "Always",
"env": [
{
"name": "GEN3_HOSTNAME",
"valueFrom": {
"configMapKeyRef": {
"name": "manifest-global",
"key": "hostname"
}
}
}
],
"volumeMounts": [
{
"name": "sower-jobs-creds-volume",
"readOnly": true,
"mountPath": "/creds.json",
"subPath": "creds.json"
}
],
"cpu-limit": "1",
"memory-limit": "1Gi"
},
"volumes": [
{
"name": "sower-jobs-creds-volume",
"secret": {
"secretName": "sower-jobs-g3auto"
}
}
],
"restart_policy": "Never"
},
{
"name": "manifest-merging",
"action": "merge-manifests",
"activeDeadlineSeconds": 86400,
"serviceAccountName": "jobs-externaldata-healdata-org",
"container": {
"name": "job-task",
"image": "707767160287.dkr.ecr.us-east-1.amazonaws.com/gen3/cdis/manifest-merging:2022.06",
"pull_policy": "Always",
"env": [
{
"name": "GEN3_HOSTNAME",
"valueFrom": {
"configMapKeyRef": {
"name": "manifest-global",
"key": "hostname"
}
}
}
],
"volumeMounts": [
{
"name": "sower-jobs-creds-volume",
"readOnly": true,
"mountPath": "/creds.json",
"subPath": "creds.json"
}
],
"cpu-limit": "1",
"memory-limit": "1Gi"
},
"volumes": [
{
"name": "sower-jobs-creds-volume",
"secret": {
"secretName": "sower-jobs-g3auto"
}
}
],
"restart_policy": "Never"
},
{
"name": "indexd-manifest",
"action": "download-indexd-manifest",
"activeDeadlineSeconds": 86400,
"serviceAccountName": "jobs-externaldata-healdata-org",
"container": {
"name": "job-task",
"image": "707767160287.dkr.ecr.us-east-1.amazonaws.com/gen3/download-indexd-manifest:2022.06",
"pull_policy": "Always",
"env": [
{
"name": "GEN3_HOSTNAME",
"valueFrom": {
"configMapKeyRef": {
"name": "manifest-global",
"key": "hostname"
}
}
}
],
"volumeMounts": [
{
"name": "sower-jobs-creds-volume",
"readOnly": true,
"mountPath": "/creds.json",
"subPath": "creds.json"
}
],
"cpu-limit": "1",
"memory-limit": "1Gi"
},
"volumes": [
{
"name": "sower-jobs-creds-volume",
"secret": {
"secretName": "sower-jobs-g3auto"
}
}
],
"restart_policy": "Never"
}
],
"ssjdispatcher": {
"job_images": {
"indexing": "707767160287.dkr.ecr.us-east-1.amazonaws.com/gen3/indexs3client:2022.06"
}
},
"indexd": {
"arborist": "true"
},
Expand All @@ -247,4 +43,4 @@
"canary": {
"default": 0
}
}
}

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