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iclaims data de-meaning #352

Merged
merged 1 commit into from
Feb 12, 2021
Merged

iclaims data de-meaning #352

merged 1 commit into from
Feb 12, 2021

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wangzhishi
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fix the logics of de-meaning in load_iclaims()

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@ppstacy ppstacy left a comment

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Hi @wangzhishi, a quick question just want to understand why do we need to do de-meaning here?

@wangzhishi
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Hi @wangzhishi, a quick question just want to understand why do we need to do de-meaning here?

just want to standardize the inputs for better optimization

@wangzhishi wangzhishi requested a review from ppstacy February 12, 2021 02:50
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@edwinnglabs edwinnglabs left a comment

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LGTM

@wangzhishi wangzhishi merged commit ab4739e into dev Feb 12, 2021
@wangzhishi wangzhishi deleted the dev-iclaims branch February 12, 2021 17:33
edwinnglabs pushed a commit that referenced this pull request Feb 13, 2021
* remove enum34 dependency (#301)

* add test_lgt_full_reproducibility (#303)

* Integrating LGT/DLT into ETS Base (#280)

* first draft of ets

* ets temp

* refresh banner and icon

* read me link

* more banners

* testing new dim of banner

* Predict fix (#281)

* fix regressor matrix extraction

* unit test for cases with mixed pos&reg regressors

* adding logo and some style for tutorial and docs

* favicon

* refactoring DLT onto ets

* refine DLT and pass all unit tests

* passed all unit tests

* unit test fix

* fixed unit test

* add test_ets.py

* Additional refinement on ETS Refactoring (#296)

* fixed some OO duplicated methods

-[x] remove duplicated modules as suggested
-[x]  remove `_get_regresso_matrix()` as suggested

* docstring update

* removing fit method in lgt

* add negative regressor test cases

* add negative regressor test

* Update test_lgt.py

* updated the test data and tests logic

* fixed numerical issues due to initialization

* minor

* bug fix

* Update conftest.py

* Create iclaims.example.csv

* temp

* Create orbit-adhoc-test[TEST].ipynb

* fixed regression issue

* Delete orbit-adhoc-test[TEST].ipynb

* removing negative test for lgt

* add test_lgt_full_reproducibility (#303)

* introducing

* small fix on refactoring ets

- refine/remove comments
- remove unused methods

Co-authored-by: Zhishi Wang <wangzhishi@users.noreply.github.com>
Co-authored-by: Yifeng Wu <yifeng.wu@uber.com>
Co-authored-by: Steve Yang <steven.s.yang@gmail.com>

* Create RELEASE.md (#307)

* utility for hyper-parameter tuning (#324)

* utility for hyper-parameter tuning

* minor

* demo for hyper tuning

* Organize Plotting functions and enhancement (#327)

* Tutorial Update - diagnostics/backtest plotting (#332)

* add ploting tutorials

* back test tutorial

* back test tutorial

* fix commets

* suppress warnings

* quick fix

* badge update

* Update tutorials notebooks (#329)

* Update tutorials notebooks

* add the notebook and dataset for regression

* push the new icalim dataset

* update the regression notebook and modify the data load function

* update for regression tutorials

* regression notebook

* Update regression.ipynb

* notebooks update

* refine verbiage; regression change

* minor cosmetics

* remove log transform since it's done in new iclaims data

* remove log transform since it's done in the new iclaims data

* filter first then standardize

* filter first then standardize

Co-authored-by: Edwin Ng <edwinng@uber.com>
Co-authored-by: Zhishi Wang <zhishiw@uber.com>
Co-authored-by: Zhishi Wang <wangzhishi@users.noreply.github.com>

* fix data url in load_iclaims() (#337)

* fix data url in load_iclaims()

* update the tutorials catalogue to reflect the changes; fix typos

* Minor updates in tutorial notebooks (#339)

* fix tutorials notebook

* update title level in regression notebook

* Feat pickle fix (#342)

* first pickle fix attempt

* better attempt by using initializer

creating an initializer class to tackle problem of #340 fixed #40

* ETS Initializer

add ets initializer and change some wording from stan to generic

* change wording from stan to generic [minor]

minor wording

* Add deprecating warnings for LGT model with regressor (#341)

* add deprecation warning for LGT regression

* remove wrong notebook

* remove wrong notebook

* minor cosmetic change (#343)

* Dev unit test (#348)

* validation for global_trend_option and regression_penalty

* unit test for fixed sm input and regression penalty

* unit test for fixed sm input

* validation for global_trend_option and regression_penalty

* unit test for fixed sm input and regression penalty

* warning message

* more smoothing input tests

* more smoothing input tests

* change level_sm_input lower bound to 0.001 from 0

* raise error message for level_sm_input lower than 0.0001

* Docstring inheritance (#351)

* add docstring inheritance

* add example jupyter notebook

* add requirements

* minor  changes

* minor formatting

* add lower bound for common substring

* Update stan_estimator.py

* Update docstring_inheritance_check.ipynb

* Update backtest.py

Co-authored-by: Edwin Ng <edwinng@uber.com>

* iclaims data de-meaning (#352)

* pumping version to 1.0.11

pumping version to 1.0.11

* bug fix for following sphinx in README.rst

* Update setup.py

Co-authored-by: CrossNox <ijmermet@gmail.com>
Co-authored-by: Steve Yang <steven.s.yang@gmail.com>
Co-authored-by: Zhishi Wang <wangzhishi@users.noreply.github.com>
Co-authored-by: Yifeng Wu <yifeng.wu@uber.com>
Co-authored-by: ppstacy <ppstacy@gmail.com>
Co-authored-by: Zhishi Wang <zhishiw@uber.com>
edwinnglabs pushed a commit that referenced this pull request Feb 19, 2021
* remove enum34 dependency (#301)

* add test_lgt_full_reproducibility (#303)

* Integrating LGT/DLT into ETS Base (#280)

* first draft of ets

* ets temp

* refresh banner and icon

* read me link

* more banners

* testing new dim of banner

* Predict fix (#281)

* fix regressor matrix extraction

* unit test for cases with mixed pos&reg regressors

* adding logo and some style for tutorial and docs

* favicon

* refactoring DLT onto ets

* refine DLT and pass all unit tests

* passed all unit tests

* unit test fix

* fixed unit test

* add test_ets.py

* Additional refinement on ETS Refactoring (#296)

* fixed some OO duplicated methods

-[x] remove duplicated modules as suggested
-[x]  remove `_get_regresso_matrix()` as suggested

* docstring update

* removing fit method in lgt

* add negative regressor test cases

* add negative regressor test

* Update test_lgt.py

* updated the test data and tests logic

* fixed numerical issues due to initialization

* minor

* bug fix

* Update conftest.py

* Create iclaims.example.csv

* temp

* Create orbit-adhoc-test[TEST].ipynb

* fixed regression issue

* Delete orbit-adhoc-test[TEST].ipynb

* removing negative test for lgt

* add test_lgt_full_reproducibility (#303)

* introducing

* small fix on refactoring ets

- refine/remove comments
- remove unused methods

Co-authored-by: Zhishi Wang <wangzhishi@users.noreply.github.com>
Co-authored-by: Yifeng Wu <yifeng.wu@uber.com>
Co-authored-by: Steve Yang <steven.s.yang@gmail.com>

* Create RELEASE.md (#307)

* utility for hyper-parameter tuning (#324)

* utility for hyper-parameter tuning

* minor

* demo for hyper tuning

* Organize Plotting functions and enhancement (#327)

* Tutorial Update - diagnostics/backtest plotting (#332)

* add ploting tutorials

* back test tutorial

* back test tutorial

* fix commets

* suppress warnings

* quick fix

* badge update

* Update tutorials notebooks (#329)

* Update tutorials notebooks

* add the notebook and dataset for regression

* push the new icalim dataset

* update the regression notebook and modify the data load function

* update for regression tutorials

* regression notebook

* Update regression.ipynb

* notebooks update

* refine verbiage; regression change

* minor cosmetics

* remove log transform since it's done in new iclaims data

* remove log transform since it's done in the new iclaims data

* filter first then standardize

* filter first then standardize

Co-authored-by: Edwin Ng <edwinng@uber.com>
Co-authored-by: Zhishi Wang <zhishiw@uber.com>
Co-authored-by: Zhishi Wang <wangzhishi@users.noreply.github.com>

* fix data url in load_iclaims() (#337)

* fix data url in load_iclaims()

* update the tutorials catalogue to reflect the changes; fix typos

* Minor updates in tutorial notebooks (#339)

* fix tutorials notebook

* update title level in regression notebook

* Feat pickle fix (#342)

* first pickle fix attempt

* better attempt by using initializer

creating an initializer class to tackle problem of #340 fixed #40

* ETS Initializer

add ets initializer and change some wording from stan to generic

* change wording from stan to generic [minor]

minor wording

* Add deprecating warnings for LGT model with regressor (#341)

* add deprecation warning for LGT regression

* remove wrong notebook

* remove wrong notebook

* minor cosmetic change (#343)

* Dev unit test (#348)

* validation for global_trend_option and regression_penalty

* unit test for fixed sm input and regression penalty

* unit test for fixed sm input

* validation for global_trend_option and regression_penalty

* unit test for fixed sm input and regression penalty

* warning message

* more smoothing input tests

* more smoothing input tests

* change level_sm_input lower bound to 0.001 from 0

* raise error message for level_sm_input lower than 0.0001

* Docstring inheritance (#351)

* add docstring inheritance

* add example jupyter notebook

* add requirements

* minor  changes

* minor formatting

* add lower bound for common substring

* Update stan_estimator.py

* Update docstring_inheritance_check.ipynb

* Update backtest.py

Co-authored-by: Edwin Ng <edwinng@uber.com>

* iclaims data de-meaning (#352)

* pumping version to 1.0.11

pumping version to 1.0.11

* bug fix for following sphinx in README.rst

* Update setup.py

* pumping version

* Update README.rst

* Update README.rst

* Update README.rst

* Update README.rst

* readme refine

* Provide Inference for MAP and Aggregated Estimator (#359)

* Create .readthedocs.yml.

* Rename .readthedocs.yml. to .readthedocs.yml

* Update .readthedocs.yml

* Dev tutorials update (#362)

* tutorials update for master branch

* Update conf.py

* Update __init__.py

* tutorial update

* notebook update

* Update lgt.ipynb

* update

* notebook

* Update pyro_basic.ipynb

* temp

* Provide Inference for MAP and Aggregated Estimator (#359)

* Update pyro_basic.ipynb

* update of notebooks

* tutorial update and proof-reading

* cell number update

* notebook minor update

* relabel notebook under exampels/

* file ext

* new tab and more updates

* readme tone change & link fix

* typo fix

* minor fix

Co-authored-by: Zhishi Wang <zhishiw@uber.com>

* Update .readthedocs.yml

* Update .readthedocs.yml

* Update regression.ipynb

* Update regression.ipynb

* Update regression.ipynb

* Update regression.ipynb

* Update regression.ipynb

* Update regression.ipynb

* Update regression.ipynb

* Update regression.ipynb

* Update regression.ipynb

Co-authored-by: CrossNox <ijmermet@gmail.com>
Co-authored-by: Steve Yang <steven.s.yang@gmail.com>
Co-authored-by: Zhishi Wang <wangzhishi@users.noreply.github.com>
Co-authored-by: Yifeng Wu <yifeng.wu@uber.com>
Co-authored-by: ppstacy <ppstacy@gmail.com>
Co-authored-by: Zhishi Wang <zhishiw@uber.com>
edwinnglabs pushed a commit that referenced this pull request Feb 19, 2021
* remove enum34 dependency (#301)

* add test_lgt_full_reproducibility (#303)

* Integrating LGT/DLT into ETS Base (#280)

* first draft of ets

* ets temp

* refresh banner and icon

* read me link

* more banners

* testing new dim of banner

* Predict fix (#281)

* fix regressor matrix extraction

* unit test for cases with mixed pos&reg regressors

* adding logo and some style for tutorial and docs

* favicon

* refactoring DLT onto ets

* refine DLT and pass all unit tests

* passed all unit tests

* unit test fix

* fixed unit test

* add test_ets.py

* Additional refinement on ETS Refactoring (#296)

* fixed some OO duplicated methods

-[x] remove duplicated modules as suggested
-[x]  remove `_get_regresso_matrix()` as suggested

* docstring update

* removing fit method in lgt

* add negative regressor test cases

* add negative regressor test

* Update test_lgt.py

* updated the test data and tests logic

* fixed numerical issues due to initialization

* minor

* bug fix

* Update conftest.py

* Create iclaims.example.csv

* temp

* Create orbit-adhoc-test[TEST].ipynb

* fixed regression issue

* Delete orbit-adhoc-test[TEST].ipynb

* removing negative test for lgt

* add test_lgt_full_reproducibility (#303)

* introducing

* small fix on refactoring ets

- refine/remove comments
- remove unused methods

Co-authored-by: Zhishi Wang <wangzhishi@users.noreply.github.com>
Co-authored-by: Yifeng Wu <yifeng.wu@uber.com>
Co-authored-by: Steve Yang <steven.s.yang@gmail.com>

* Create RELEASE.md (#307)

* utility for hyper-parameter tuning (#324)

* utility for hyper-parameter tuning

* minor

* demo for hyper tuning

* Organize Plotting functions and enhancement (#327)

* Tutorial Update - diagnostics/backtest plotting (#332)

* add ploting tutorials

* back test tutorial

* back test tutorial

* fix commets

* suppress warnings

* quick fix

* badge update

* Update tutorials notebooks (#329)

* Update tutorials notebooks

* add the notebook and dataset for regression

* push the new icalim dataset

* update the regression notebook and modify the data load function

* update for regression tutorials

* regression notebook

* Update regression.ipynb

* notebooks update

* refine verbiage; regression change

* minor cosmetics

* remove log transform since it's done in new iclaims data

* remove log transform since it's done in the new iclaims data

* filter first then standardize

* filter first then standardize

Co-authored-by: Edwin Ng <edwinng@uber.com>
Co-authored-by: Zhishi Wang <zhishiw@uber.com>
Co-authored-by: Zhishi Wang <wangzhishi@users.noreply.github.com>

* fix data url in load_iclaims() (#337)

* fix data url in load_iclaims()

* update the tutorials catalogue to reflect the changes; fix typos

* Minor updates in tutorial notebooks (#339)

* fix tutorials notebook

* update title level in regression notebook

* Feat pickle fix (#342)

* first pickle fix attempt

* better attempt by using initializer

creating an initializer class to tackle problem of #340 fixed #40

* ETS Initializer

add ets initializer and change some wording from stan to generic

* change wording from stan to generic [minor]

minor wording

* Add deprecating warnings for LGT model with regressor (#341)

* add deprecation warning for LGT regression

* remove wrong notebook

* remove wrong notebook

* minor cosmetic change (#343)

* Dev unit test (#348)

* validation for global_trend_option and regression_penalty

* unit test for fixed sm input and regression penalty

* unit test for fixed sm input

* validation for global_trend_option and regression_penalty

* unit test for fixed sm input and regression penalty

* warning message

* more smoothing input tests

* more smoothing input tests

* change level_sm_input lower bound to 0.001 from 0

* raise error message for level_sm_input lower than 0.0001

* Docstring inheritance (#351)

* add docstring inheritance

* add example jupyter notebook

* add requirements

* minor  changes

* minor formatting

* add lower bound for common substring

* Update stan_estimator.py

* Update docstring_inheritance_check.ipynb

* Update backtest.py

Co-authored-by: Edwin Ng <edwinng@uber.com>

* iclaims data de-meaning (#352)

* pumping version to 1.0.11

pumping version to 1.0.11

* bug fix for following sphinx in README.rst

* Update setup.py

* pumping version

* Update README.rst

* Update README.rst

* Update README.rst

* Update README.rst

* readme refine

* Provide Inference for MAP and Aggregated Estimator (#359)

* Create .readthedocs.yml.

* Rename .readthedocs.yml. to .readthedocs.yml

* Update .readthedocs.yml

* Dev tutorials update (#362)

* tutorials update for master branch

* Update conf.py

* Update __init__.py

* tutorial update

* notebook update

* Update lgt.ipynb

* update

* notebook

* Update pyro_basic.ipynb

* temp

* Provide Inference for MAP and Aggregated Estimator (#359)

* Update pyro_basic.ipynb

* update of notebooks

* tutorial update and proof-reading

* cell number update

* notebook minor update

* relabel notebook under exampels/

* file ext

* new tab and more updates

* readme tone change & link fix

* typo fix

* minor fix

Co-authored-by: Zhishi Wang <zhishiw@uber.com>

* Update .readthedocs.yml

* Update .readthedocs.yml

* Update regression.ipynb

* Update regression.ipynb

* Update regression.ipynb

* Update regression.ipynb

* Update regression.ipynb

* Update regression.ipynb

* Update regression.ipynb

* Update regression.ipynb

* Update regression.ipynb

* Update README.md

Co-authored-by: CrossNox <ijmermet@gmail.com>
Co-authored-by: Steve Yang <steven.s.yang@gmail.com>
Co-authored-by: Zhishi Wang <wangzhishi@users.noreply.github.com>
Co-authored-by: Yifeng Wu <yifeng.wu@uber.com>
Co-authored-by: ppstacy <ppstacy@gmail.com>
Co-authored-by: Zhishi Wang <zhishiw@uber.com>
edwinnglabs pushed a commit that referenced this pull request Feb 19, 2021
* remove enum34 dependency (#301)

* add test_lgt_full_reproducibility (#303)

* Integrating LGT/DLT into ETS Base (#280)

* first draft of ets

* ets temp

* refresh banner and icon

* read me link

* more banners

* testing new dim of banner

* Predict fix (#281)

* fix regressor matrix extraction

* unit test for cases with mixed pos&reg regressors

* adding logo and some style for tutorial and docs

* favicon

* refactoring DLT onto ets

* refine DLT and pass all unit tests

* passed all unit tests

* unit test fix

* fixed unit test

* add test_ets.py

* Additional refinement on ETS Refactoring (#296)

* fixed some OO duplicated methods

-[x] remove duplicated modules as suggested
-[x]  remove `_get_regresso_matrix()` as suggested

* docstring update

* removing fit method in lgt

* add negative regressor test cases

* add negative regressor test

* Update test_lgt.py

* updated the test data and tests logic

* fixed numerical issues due to initialization

* minor

* bug fix

* Update conftest.py

* Create iclaims.example.csv

* temp

* Create orbit-adhoc-test[TEST].ipynb

* fixed regression issue

* Delete orbit-adhoc-test[TEST].ipynb

* removing negative test for lgt

* add test_lgt_full_reproducibility (#303)

* introducing

* small fix on refactoring ets

- refine/remove comments
- remove unused methods

Co-authored-by: Zhishi Wang <wangzhishi@users.noreply.github.com>
Co-authored-by: Yifeng Wu <yifeng.wu@uber.com>
Co-authored-by: Steve Yang <steven.s.yang@gmail.com>

* Create RELEASE.md (#307)

* utility for hyper-parameter tuning (#324)

* utility for hyper-parameter tuning

* minor

* demo for hyper tuning

* Organize Plotting functions and enhancement (#327)

* Tutorial Update - diagnostics/backtest plotting (#332)

* add ploting tutorials

* back test tutorial

* back test tutorial

* fix commets

* suppress warnings

* quick fix

* badge update

* Update tutorials notebooks (#329)

* Update tutorials notebooks

* add the notebook and dataset for regression

* push the new icalim dataset

* update the regression notebook and modify the data load function

* update for regression tutorials

* regression notebook

* Update regression.ipynb

* notebooks update

* refine verbiage; regression change

* minor cosmetics

* remove log transform since it's done in new iclaims data

* remove log transform since it's done in the new iclaims data

* filter first then standardize

* filter first then standardize

Co-authored-by: Edwin Ng <edwinng@uber.com>
Co-authored-by: Zhishi Wang <zhishiw@uber.com>
Co-authored-by: Zhishi Wang <wangzhishi@users.noreply.github.com>

* fix data url in load_iclaims() (#337)

* fix data url in load_iclaims()

* update the tutorials catalogue to reflect the changes; fix typos

* Minor updates in tutorial notebooks (#339)

* fix tutorials notebook

* update title level in regression notebook

* Feat pickle fix (#342)

* first pickle fix attempt

* better attempt by using initializer

creating an initializer class to tackle problem of #340 fixed #40

* ETS Initializer

add ets initializer and change some wording from stan to generic

* change wording from stan to generic [minor]

minor wording

* Add deprecating warnings for LGT model with regressor (#341)

* add deprecation warning for LGT regression

* remove wrong notebook

* remove wrong notebook

* minor cosmetic change (#343)

* Dev unit test (#348)

* validation for global_trend_option and regression_penalty

* unit test for fixed sm input and regression penalty

* unit test for fixed sm input

* validation for global_trend_option and regression_penalty

* unit test for fixed sm input and regression penalty

* warning message

* more smoothing input tests

* more smoothing input tests

* change level_sm_input lower bound to 0.001 from 0

* raise error message for level_sm_input lower than 0.0001

* Docstring inheritance (#351)

* add docstring inheritance

* add example jupyter notebook

* add requirements

* minor  changes

* minor formatting

* add lower bound for common substring

* Update stan_estimator.py

* Update docstring_inheritance_check.ipynb

* Update backtest.py

Co-authored-by: Edwin Ng <edwinng@uber.com>

* iclaims data de-meaning (#352)

* pumping version to 1.0.11

pumping version to 1.0.11

* bug fix for following sphinx in README.rst

* Update setup.py

* pumping version

* Update README.rst

* Update README.rst

* Update README.rst

* Update README.rst

* readme refine

* Provide Inference for MAP and Aggregated Estimator (#359)

* Create .readthedocs.yml.

* Rename .readthedocs.yml. to .readthedocs.yml

* Update .readthedocs.yml

* Dev tutorials update (#362)

* tutorials update for master branch

* Update conf.py

* Update __init__.py

* tutorial update

* notebook update

* Update lgt.ipynb

* update

* notebook

* Update pyro_basic.ipynb

* temp

* Provide Inference for MAP and Aggregated Estimator (#359)

* Update pyro_basic.ipynb

* update of notebooks

* tutorial update and proof-reading

* cell number update

* notebook minor update

* relabel notebook under exampels/

* file ext

* new tab and more updates

* readme tone change & link fix

* typo fix

* minor fix

Co-authored-by: Zhishi Wang <zhishiw@uber.com>

* Update .readthedocs.yml

* Update .readthedocs.yml

* Update regression.ipynb

* Update regression.ipynb

* Update regression.ipynb

* Update regression.ipynb

* Update regression.ipynb

* Update regression.ipynb

* Update regression.ipynb

* Update regression.ipynb

* Update regression.ipynb

* Update README.md

Co-authored-by: CrossNox <ijmermet@gmail.com>
Co-authored-by: Steve Yang <steven.s.yang@gmail.com>
Co-authored-by: Zhishi Wang <wangzhishi@users.noreply.github.com>
Co-authored-by: Yifeng Wu <yifeng.wu@uber.com>
Co-authored-by: ppstacy <ppstacy@gmail.com>
Co-authored-by: Zhishi Wang <zhishiw@uber.com>
edwinnglabs pushed a commit that referenced this pull request Mar 27, 2021
* remove enum34 dependency (#301)

* add test_lgt_full_reproducibility (#303)

* Integrating LGT/DLT into ETS Base (#280)

* first draft of ets

* ets temp

* refresh banner and icon

* read me link

* more banners

* testing new dim of banner

* Predict fix (#281)

* fix regressor matrix extraction

* unit test for cases with mixed pos&reg regressors

* adding logo and some style for tutorial and docs

* favicon

* refactoring DLT onto ets

* refine DLT and pass all unit tests

* passed all unit tests

* unit test fix

* fixed unit test

* add test_ets.py

* Additional refinement on ETS Refactoring (#296)

* fixed some OO duplicated methods

-[x] remove duplicated modules as suggested
-[x]  remove `_get_regresso_matrix()` as suggested

* docstring update

* removing fit method in lgt

* add negative regressor test cases

* add negative regressor test

* Update test_lgt.py

* updated the test data and tests logic

* fixed numerical issues due to initialization

* minor

* bug fix

* Update conftest.py

* Create iclaims.example.csv

* temp

* Create orbit-adhoc-test[TEST].ipynb

* fixed regression issue

* Delete orbit-adhoc-test[TEST].ipynb

* removing negative test for lgt

* add test_lgt_full_reproducibility (#303)

* introducing

* small fix on refactoring ets

- refine/remove comments
- remove unused methods

Co-authored-by: Zhishi Wang <wangzhishi@users.noreply.github.com>
Co-authored-by: Yifeng Wu <yifeng.wu@uber.com>
Co-authored-by: Steve Yang <steven.s.yang@gmail.com>

* Create RELEASE.md (#307)

* utility for hyper-parameter tuning (#324)

* utility for hyper-parameter tuning

* minor

* demo for hyper tuning

* Organize Plotting functions and enhancement (#327)

* Tutorial Update - diagnostics/backtest plotting (#332)

* add ploting tutorials

* back test tutorial

* back test tutorial

* fix commets

* suppress warnings

* quick fix

* badge update

* Update tutorials notebooks (#329)

* Update tutorials notebooks

* add the notebook and dataset for regression

* push the new icalim dataset

* update the regression notebook and modify the data load function

* update for regression tutorials

* regression notebook

* Update regression.ipynb

* notebooks update

* refine verbiage; regression change

* minor cosmetics

* remove log transform since it's done in new iclaims data

* remove log transform since it's done in the new iclaims data

* filter first then standardize

* filter first then standardize

Co-authored-by: Edwin Ng <edwinng@uber.com>
Co-authored-by: Zhishi Wang <zhishiw@uber.com>
Co-authored-by: Zhishi Wang <wangzhishi@users.noreply.github.com>

* fix data url in load_iclaims() (#337)

* fix data url in load_iclaims()

* update the tutorials catalogue to reflect the changes; fix typos

* Minor updates in tutorial notebooks (#339)

* fix tutorials notebook

* update title level in regression notebook

* Feat pickle fix (#342)

* first pickle fix attempt

* better attempt by using initializer

creating an initializer class to tackle problem of #340 fixed #40

* ETS Initializer

add ets initializer and change some wording from stan to generic

* change wording from stan to generic [minor]

minor wording

* Add deprecating warnings for LGT model with regressor (#341)

* add deprecation warning for LGT regression

* remove wrong notebook

* remove wrong notebook

* minor cosmetic change (#343)

* Dev unit test (#348)

* validation for global_trend_option and regression_penalty

* unit test for fixed sm input and regression penalty

* unit test for fixed sm input

* validation for global_trend_option and regression_penalty

* unit test for fixed sm input and regression penalty

* warning message

* more smoothing input tests

* more smoothing input tests

* change level_sm_input lower bound to 0.001 from 0

* raise error message for level_sm_input lower than 0.0001

* Docstring inheritance (#351)

* add docstring inheritance

* add example jupyter notebook

* add requirements

* minor  changes

* minor formatting

* add lower bound for common substring

* Update stan_estimator.py

* Update docstring_inheritance_check.ipynb

* Update backtest.py

Co-authored-by: Edwin Ng <edwinng@uber.com>

* iclaims data de-meaning (#352)

* pumping version to 1.0.11

pumping version to 1.0.11

* bug fix for following sphinx in README.rst

* Update setup.py

Co-authored-by: CrossNox <ijmermet@gmail.com>
Co-authored-by: Steve Yang <steven.s.yang@gmail.com>
Co-authored-by: Zhishi Wang <wangzhishi@users.noreply.github.com>
Co-authored-by: Yifeng Wu <yifeng.wu@uber.com>
Co-authored-by: ppstacy <ppstacy@gmail.com>
Co-authored-by: Zhishi Wang <zhishiw@uber.com>
edwinnglabs pushed a commit that referenced this pull request Mar 27, 2021
* remove enum34 dependency (#301)

* add test_lgt_full_reproducibility (#303)

* Integrating LGT/DLT into ETS Base (#280)

* first draft of ets

* ets temp

* refresh banner and icon

* read me link

* more banners

* testing new dim of banner

* Predict fix (#281)

* fix regressor matrix extraction

* unit test for cases with mixed pos&reg regressors

* adding logo and some style for tutorial and docs

* favicon

* refactoring DLT onto ets

* refine DLT and pass all unit tests

* passed all unit tests

* unit test fix

* fixed unit test

* add test_ets.py

* Additional refinement on ETS Refactoring (#296)

* fixed some OO duplicated methods

-[x] remove duplicated modules as suggested
-[x]  remove `_get_regresso_matrix()` as suggested

* docstring update

* removing fit method in lgt

* add negative regressor test cases

* add negative regressor test

* Update test_lgt.py

* updated the test data and tests logic

* fixed numerical issues due to initialization

* minor

* bug fix

* Update conftest.py

* Create iclaims.example.csv

* temp

* Create orbit-adhoc-test[TEST].ipynb

* fixed regression issue

* Delete orbit-adhoc-test[TEST].ipynb

* removing negative test for lgt

* add test_lgt_full_reproducibility (#303)

* introducing

* small fix on refactoring ets

- refine/remove comments
- remove unused methods

Co-authored-by: Zhishi Wang <wangzhishi@users.noreply.github.com>
Co-authored-by: Yifeng Wu <yifeng.wu@uber.com>
Co-authored-by: Steve Yang <steven.s.yang@gmail.com>

* Create RELEASE.md (#307)

* utility for hyper-parameter tuning (#324)

* utility for hyper-parameter tuning

* minor

* demo for hyper tuning

* Organize Plotting functions and enhancement (#327)

* Tutorial Update - diagnostics/backtest plotting (#332)

* add ploting tutorials

* back test tutorial

* back test tutorial

* fix commets

* suppress warnings

* quick fix

* badge update

* Update tutorials notebooks (#329)

* Update tutorials notebooks

* add the notebook and dataset for regression

* push the new icalim dataset

* update the regression notebook and modify the data load function

* update for regression tutorials

* regression notebook

* Update regression.ipynb

* notebooks update

* refine verbiage; regression change

* minor cosmetics

* remove log transform since it's done in new iclaims data

* remove log transform since it's done in the new iclaims data

* filter first then standardize

* filter first then standardize

Co-authored-by: Edwin Ng <edwinng@uber.com>
Co-authored-by: Zhishi Wang <zhishiw@uber.com>
Co-authored-by: Zhishi Wang <wangzhishi@users.noreply.github.com>

* fix data url in load_iclaims() (#337)

* fix data url in load_iclaims()

* update the tutorials catalogue to reflect the changes; fix typos

* Minor updates in tutorial notebooks (#339)

* fix tutorials notebook

* update title level in regression notebook

* Feat pickle fix (#342)

* first pickle fix attempt

* better attempt by using initializer

creating an initializer class to tackle problem of #340 fixed #40

* ETS Initializer

add ets initializer and change some wording from stan to generic

* change wording from stan to generic [minor]

minor wording

* Add deprecating warnings for LGT model with regressor (#341)

* add deprecation warning for LGT regression

* remove wrong notebook

* remove wrong notebook

* minor cosmetic change (#343)

* Dev unit test (#348)

* validation for global_trend_option and regression_penalty

* unit test for fixed sm input and regression penalty

* unit test for fixed sm input

* validation for global_trend_option and regression_penalty

* unit test for fixed sm input and regression penalty

* warning message

* more smoothing input tests

* more smoothing input tests

* change level_sm_input lower bound to 0.001 from 0

* raise error message for level_sm_input lower than 0.0001

* Docstring inheritance (#351)

* add docstring inheritance

* add example jupyter notebook

* add requirements

* minor  changes

* minor formatting

* add lower bound for common substring

* Update stan_estimator.py

* Update docstring_inheritance_check.ipynb

* Update backtest.py

Co-authored-by: Edwin Ng <edwinng@uber.com>

* iclaims data de-meaning (#352)

* pumping version to 1.0.11

pumping version to 1.0.11

* bug fix for following sphinx in README.rst

* Update setup.py

* pumping version

* Update README.rst

* Update README.rst

* Update README.rst

* Update README.rst

* readme refine

* Provide Inference for MAP and Aggregated Estimator (#359)

* Create .readthedocs.yml.

* Rename .readthedocs.yml. to .readthedocs.yml

* Update .readthedocs.yml

* Dev tutorials update (#362)

* tutorials update for master branch

* Update conf.py

* Update __init__.py

* tutorial update

* notebook update

* Update lgt.ipynb

* update

* notebook

* Update pyro_basic.ipynb

* temp

* Provide Inference for MAP and Aggregated Estimator (#359)

* Update pyro_basic.ipynb

* update of notebooks

* tutorial update and proof-reading

* cell number update

* notebook minor update

* relabel notebook under exampels/

* file ext

* new tab and more updates

* readme tone change & link fix

* typo fix

* minor fix

Co-authored-by: Zhishi Wang <zhishiw@uber.com>

* Update .readthedocs.yml

* Update .readthedocs.yml

* Update regression.ipynb

* Update regression.ipynb

* Update regression.ipynb

* Update regression.ipynb

* Update regression.ipynb

* Update regression.ipynb

* Update regression.ipynb

* Update regression.ipynb

* Update regression.ipynb

Co-authored-by: CrossNox <ijmermet@gmail.com>
Co-authored-by: Steve Yang <steven.s.yang@gmail.com>
Co-authored-by: Zhishi Wang <wangzhishi@users.noreply.github.com>
Co-authored-by: Yifeng Wu <yifeng.wu@uber.com>
Co-authored-by: ppstacy <ppstacy@gmail.com>
Co-authored-by: Zhishi Wang <zhishiw@uber.com>
edwinnglabs pushed a commit that referenced this pull request Mar 27, 2021
* remove enum34 dependency (#301)

* add test_lgt_full_reproducibility (#303)

* Integrating LGT/DLT into ETS Base (#280)

* first draft of ets

* ets temp

* refresh banner and icon

* read me link

* more banners

* testing new dim of banner

* Predict fix (#281)

* fix regressor matrix extraction

* unit test for cases with mixed pos&reg regressors

* adding logo and some style for tutorial and docs

* favicon

* refactoring DLT onto ets

* refine DLT and pass all unit tests

* passed all unit tests

* unit test fix

* fixed unit test

* add test_ets.py

* Additional refinement on ETS Refactoring (#296)

* fixed some OO duplicated methods

-[x] remove duplicated modules as suggested
-[x]  remove `_get_regresso_matrix()` as suggested

* docstring update

* removing fit method in lgt

* add negative regressor test cases

* add negative regressor test

* Update test_lgt.py

* updated the test data and tests logic

* fixed numerical issues due to initialization

* minor

* bug fix

* Update conftest.py

* Create iclaims.example.csv

* temp

* Create orbit-adhoc-test[TEST].ipynb

* fixed regression issue

* Delete orbit-adhoc-test[TEST].ipynb

* removing negative test for lgt

* add test_lgt_full_reproducibility (#303)

* introducing

* small fix on refactoring ets

- refine/remove comments
- remove unused methods

Co-authored-by: Zhishi Wang <wangzhishi@users.noreply.github.com>
Co-authored-by: Yifeng Wu <yifeng.wu@uber.com>
Co-authored-by: Steve Yang <steven.s.yang@gmail.com>

* Create RELEASE.md (#307)

* utility for hyper-parameter tuning (#324)

* utility for hyper-parameter tuning

* minor

* demo for hyper tuning

* Organize Plotting functions and enhancement (#327)

* Tutorial Update - diagnostics/backtest plotting (#332)

* add ploting tutorials

* back test tutorial

* back test tutorial

* fix commets

* suppress warnings

* quick fix

* badge update

* Update tutorials notebooks (#329)

* Update tutorials notebooks

* add the notebook and dataset for regression

* push the new icalim dataset

* update the regression notebook and modify the data load function

* update for regression tutorials

* regression notebook

* Update regression.ipynb

* notebooks update

* refine verbiage; regression change

* minor cosmetics

* remove log transform since it's done in new iclaims data

* remove log transform since it's done in the new iclaims data

* filter first then standardize

* filter first then standardize

Co-authored-by: Edwin Ng <edwinng@uber.com>
Co-authored-by: Zhishi Wang <zhishiw@uber.com>
Co-authored-by: Zhishi Wang <wangzhishi@users.noreply.github.com>

* fix data url in load_iclaims() (#337)

* fix data url in load_iclaims()

* update the tutorials catalogue to reflect the changes; fix typos

* Minor updates in tutorial notebooks (#339)

* fix tutorials notebook

* update title level in regression notebook

* Feat pickle fix (#342)

* first pickle fix attempt

* better attempt by using initializer

creating an initializer class to tackle problem of #340 fixed #40

* ETS Initializer

add ets initializer and change some wording from stan to generic

* change wording from stan to generic [minor]

minor wording

* Add deprecating warnings for LGT model with regressor (#341)

* add deprecation warning for LGT regression

* remove wrong notebook

* remove wrong notebook

* minor cosmetic change (#343)

* Dev unit test (#348)

* validation for global_trend_option and regression_penalty

* unit test for fixed sm input and regression penalty

* unit test for fixed sm input

* validation for global_trend_option and regression_penalty

* unit test for fixed sm input and regression penalty

* warning message

* more smoothing input tests

* more smoothing input tests

* change level_sm_input lower bound to 0.001 from 0

* raise error message for level_sm_input lower than 0.0001

* Docstring inheritance (#351)

* add docstring inheritance

* add example jupyter notebook

* add requirements

* minor  changes

* minor formatting

* add lower bound for common substring

* Update stan_estimator.py

* Update docstring_inheritance_check.ipynb

* Update backtest.py

Co-authored-by: Edwin Ng <edwinng@uber.com>

* iclaims data de-meaning (#352)

* pumping version to 1.0.11

pumping version to 1.0.11

* bug fix for following sphinx in README.rst

* Update setup.py

* pumping version

* Update README.rst

* Update README.rst

* Update README.rst

* Update README.rst

* readme refine

* Provide Inference for MAP and Aggregated Estimator (#359)

* Create .readthedocs.yml.

* Rename .readthedocs.yml. to .readthedocs.yml

* Update .readthedocs.yml

* Dev tutorials update (#362)

* tutorials update for master branch

* Update conf.py

* Update __init__.py

* tutorial update

* notebook update

* Update lgt.ipynb

* update

* notebook

* Update pyro_basic.ipynb

* temp

* Provide Inference for MAP and Aggregated Estimator (#359)

* Update pyro_basic.ipynb

* update of notebooks

* tutorial update and proof-reading

* cell number update

* notebook minor update

* relabel notebook under exampels/

* file ext

* new tab and more updates

* readme tone change & link fix

* typo fix

* minor fix

Co-authored-by: Zhishi Wang <zhishiw@uber.com>

* Update .readthedocs.yml

* Update .readthedocs.yml

* Update regression.ipynb

* Update regression.ipynb

* Update regression.ipynb

* Update regression.ipynb

* Update regression.ipynb

* Update regression.ipynb

* Update regression.ipynb

* Update regression.ipynb

* Update regression.ipynb

* Update README.md

Co-authored-by: CrossNox <ijmermet@gmail.com>
Co-authored-by: Steve Yang <steven.s.yang@gmail.com>
Co-authored-by: Zhishi Wang <wangzhishi@users.noreply.github.com>
Co-authored-by: Yifeng Wu <yifeng.wu@uber.com>
Co-authored-by: ppstacy <ppstacy@gmail.com>
Co-authored-by: Zhishi Wang <zhishiw@uber.com>
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3 participants