0.5.0

What's Changed

• feat: fill BPSEQ with gaps by @tzok in #229
• fix: dot-bracket encoding with gaps by @tzok in #230
• fix: incorrect strand sequence by @tzok in #231
• feat: support alternate locations by @tzok in #243
• feat: resolve occupancy related clashes by @tzok in #244
• feat: improve nucleotide detection heuristic by @tzok in #260
• feat: use highs solver if available by @tzok in #261
• fix: JSON export in annotator by @tzok in #262
• feat: improve motif extraction by @tzok in #263
• feat: improve mmcif transformer by @tzok in #270
• feat: improve molecule filtering by @tzok in #271
• fix: add missing entity category by @tzok in #272
• feat: add retain category functionality by @tzok in #273
• fix: one letter name for long cif inputs by @tzok in #291
• feat: improve molecule filter by @tzok in #290
• fix: add missing mmcif dictionary file by @tzok in #301
• feat: implement parsing to DataFrames by @tzok in #316

Dependencies updated regularly thanks to @dependabot.

Full Changelog: 0.4.0...0.5.0