Treddy debug gh 830 #23
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* add struct timespec start/end times to job struct * add custom MPI reduction ops for max/min values of struct timespecs * add logutils code for extracting start/end timespecs * update some analysis utilities to use new timespec values
method for calculating this depends on log format version, so a helper routine seems useful for utilities
* new logutils function (`darshan_log_get_job_runtime`) to
calculate job runtime as a floating point value
* for pre 3.41 logs, this is end-start+1 (i.e., runtime
rounded up to nearest integer)
* for 3.41+ logs, this is exact runtime to nsec precision
* CFFI definition updates of job types, type sizes
* CFFI bindings updates to extract new job timers and runtime
* updates to summary and report interfaces to use new job timers
and runtime values
* updates to plotting code to use new job timers and runtime
values
* `plot_dxt_heatmap.py` in particular had some code removed
that tried to correct for a calculated runtime of 0
* updates to tests to accommodate new changes to various
interfaces and record formats
* `test_plot_dxt_heatmap.py` has changes to avoid need for
rounding up calculated runtime
* new ior-PNETCF/ior-HDF5 log files are included as previous
ones are no longer valid due to log format changes
* based on analysis of test memory usage with `pytest-monitor`, try temporarily xfailing one of the more expensive cases in `test_vertical_resize()`
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