Global Biotic Interactions provides access to existing species interaction datasets

sample linux x86_64 ELF virus

Parasite like creepy creatures

This repository has been archived, currently maintained version is at https://github.com/iii-companion/companion

dEploid is designed for deconvoluting mixed genomes with unknown proportions. Traditional ‘phasing’ programs are limited to diploid organisms. Our method modifies Li and Stephen’s algorithm with Markov chain Monte Carlo (MCMC) approaches, and builds a generic framework that allows haloptype searches in a multiple infection setting.

Accesses parasite occurrence records from the London Natural History Museum's Host-Parasite database, which contains over a quarter of a million helminth records.

Code repository for the publication: "Whole-genome sequencing of Schistosoma mansoni reveals extensive diversity with limited selection despite mass drug administration"

Your brain is over run with spiders, monsters, and all kinds of ghouls! Time to eliminate them!

An R interface for dEploid. dEploid is designed for deconvoluting mixed genomes with unknown proportions. Traditional ‘phasing’ programs are limited to diploid organisms. Our method modifies Li and Stephen’s algorithm with Markov chain Monte Carlo (MCMC) approaches, and builds a generic framework that allows haloptype searches in a multiple infe…

🎧 Papers discussed on various shows on MicrobeTV

This repository focuses on classifying microscopic images of parasites using deep learning. It features a dataset of 15 parasitic classes, enhanced by Keras's image preprocessing and transfer learning with ResNet. The project aims to improve diagnostic capabilities in medical parasitology and has achieved great results in competitive evaluation.

Tracking for my exhibition and LTI

Chelsea Thorn Research Profile

A custom bioinformatic workflow for UPDX (Universal Parasite Detection assay) sequences analysis.

⛔ ARCHIVED ⛔ Host and Parasite Data Across Sources

Visual white noise generator