fastme

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For Species Tree estimation using similarity matrix, distance matrix and NJ (FastME)

python bioinformatics bash-script neighbor-joining triplets fastme quartets

Dockerfile for OrthoFinder tool

docker blast python2 mcl orthofinder fastme dlcpar

A Nextflow pipeline to generate a phylogenetic tree from SKA alignment

workflow nextflow alignment ska phylogeny fastme phylogenetic-tree nextflow-pipeline reference-free fasttree iqtree raxml-ng split-kmer rapidnj

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