Update PE CI tests

Author: sage-wright

tests/workflows/theiaprok/test_wf_theiaprok_illumina_pe.yml

@@ -512,9 +512,9 @@
     - path: miniwdl_run/wdl/tasks/taxon_id/contamination/task_midas.wdl
       md5sum: 64caaaff5910ac0036e2659434500962
     - path: miniwdl_run/wdl/workflows/theiaprok/wf_theiaprok_illumina_pe.wdl
-      md5sum: cea2e72701662adca0b30fd48baca3ab
+      md5sum: 8d2c15e11472f0ca1df84ddcbb979cf2
     - path: miniwdl_run/wdl/workflows/utilities/wf_merlin_magic.wdl
-      md5sum: e797bbc7ceb4f62728f7ef315d9a4e40
+      md5sum: 7e66aa483f679261d1e5fd11f22e4f5d
     - path: miniwdl_run/wdl/workflows/utilities/wf_read_QC_trim_pe.wdl
       contains: ["version", "QC", "output"]
     - path: miniwdl_run/workflow.log