Simulation/run single simulation #25
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… YAML for the configuration as this is much more flexible than our current config file.
wkerzendorf
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Simulation/run single simulation
wkerzendorf
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Feb 25, 2019
* add tardis_env3 * clean up tardis 3 env file * change of setup.py * update astropy_helpers to 3.1 and make base.py python3 compatible * upgrade all setup_package to use new astropy_helpers * update to new version * make the ctests python3 compatible * fix the readers from file(xx) to open() fix the conftest to use the right .so file rewrite the continuum_compare * skip problems in test_cmontecarlo * fixed all python3 pytest errors * change travis to python 3 * adding language directive * Fix continuum_compare_data to be compatible with python3 * Remove duplicate import of cmontecarlo_methods * Fix xfail in test_bf_cross_section * moved density comment to properties from parameters (#25) * moved density comment to properties from parameters * moved all @Property comments to property section from parameter docstring * added luminosity_requested and electron_densities to model class docstring * convert @Property comments to numpydoc style Attribute comments. * use Astropy 1.3 constants throughout TARDIS * convert byte strings in atomic hdf5 to actual strings with ascii encoding * add the use of tardis constants to all files in tardis * python3 fix * fix pep8 and deprecatio * fix python3 * fix for unit constants * update pandas to use loc * fix the .dot reference file and update the dot2tex installation * update travis to work with the new tardis3 refdata * update tests for plasma dot * fix python3 print * remove dot2tex testing as it is not python 3 compatible yet * fix python 3 print statements again * use new ah_bootstrap.py
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I added a method
simulateto model_radial_oned. This will just perform one calculation using the current model.The far greater change in this PR is change to the YAML configuration files. There's an example in the data directory.
@ssim @mklauser can you have a quick look if that is to your liking. Everything seems to work - so far .