Delete all trailing whitespaces and tabs to 2 spaces

Common/doc/docmain.hpp

@@ -1,9 +1,9 @@
-/*!
- * \file docmain.hpp
- * \brief This file contains documentation for Doxygen and does not have any significance with respect to C++.
- * \author F. Palacios
- * \version 6.2.0 "Falcon"
- *
+/*!
+ * \file docmain.hpp
+ * \brief This file contains documentation for Doxygen and does not have any significance with respect to C++.
+ * \author F. Palacios
+ * \version 6.2.0 "Falcon"
+ *
  * The current SU2 release has been coordinated by the
  * SU2 International Developers Society <www.su2devsociety.org>
  * with selected contributions from the open-source community.
@@ -14,85 +14,85 @@
  *  - Prof. Rafael Palacios' group at Imperial College London.
  *  - Prof. Edwin van der Weide's group at the University of Twente.
  *  - Prof. Vincent Terrapon's group at the University of Liege.
- *
+ *
  * Copyright 2012-2019, Francisco D. Palacios, Thomas D. Economon,
- *                      Tim Albring, and the SU2 contributors.
- *
- * SU2 is free software; you can redistribute it and/or
- * modify it under the terms of the GNU Lesser General Public
- * License as published by the Free Software Foundation; either
- * version 2.1 of the License, or (at your option) any later version.
- *
- * SU2 is distributed in the hope that it will be useful,
- * but WITHOUT ANY WARRANTY; without even the implied warranty of
- * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU
- * Lesser General Public License for more details.
- *
- * You should have received a copy of the GNU Lesser General Public
- * License along with SU2. If not, see <http://www.gnu.org/licenses/>.
- */
-
-/*! 
- * \mainpage SU2 version 6.2.0 "Falcon"
- * SU2 suite is an open-source collection of C++ based software tools
- * to perform PDE analysis and PDE constrained optimization problems.  The toolset is designed with 
- * computational fluid dynamics and aerodynamic shape optimization in mind, but is extensible to
- * include other families of governing equations such as potential flow, electrodynamics, chemically reacting
- * flows, and many others.  SU2 is released under an
- * open-source license.
- * 
- * The following technical documentation describes the structure and details of the source code for developers. 
- */
-
-/*!
- * \defgroup Config Descriptions of Configuration Options.
- * \brief Group of variables that can be set using the configuration file.
- */
-
-/*!
- * \defgroup ConvDiscr Discretization of the convective terms.
- * \brief Group of classes which define the numerical methods for 
- *		  discretizing the convective terms of a Partial Differential Equation. 
- *		  There are methods for solving the direct, adjoint and linearized 
- *		  systems of equations.
- */
-
-/*!
- * \defgroup ViscDiscr Discretization of the viscous terms.
- * \brief Group of classes which define the numerical methods for 
- *		  discretizing the viscous terms of a Partial Differential Equation. 
- *		  There are methods for solving the direct, adjoint and linearized 
- *		  systems of equations.
- */
-
-/*!
- * \defgroup SourceDiscr Discretization of the source terms.
- * \brief Group of classes which define the numerical methods for 
- *		  discretizing the source terms of a Partial Differential Equation. 
- *		  There are methods for solving the direct, adjoint and linearized 
- *		  systems of equations.
- */
-
-/*!
- * \defgroup Potential_Flow_Equation Solving the potential flow equation.
- * \brief Group of classes which define the system of Potential flow equation in 
- *		  three formulations: direct, adjoint, and linearized.
- */
-
-/*!
- * \defgroup Euler_Equations Solving the Euler's equations.
- * \brief Group of classes which define the system of Euler equations in 
- *		  three formulations: direct, adjoint, and linearized.
- */
-
-/*!
- * \defgroup Navier_Stokes_Equations Solving the Navier-Stokes' equations.
- * \brief Group of classes which define the system of Navier-Stokes equations in 
- *		  three formulations: direct, adjoint, and linearized.
- */
-
-/*!
- * \defgroup Turbulence_Model Solving the turbulence models.
- * \brief Group of classes which define the turbulence model in 
- *		  three formulations: direct, adjoint, and linearized.
- */
+ *                      Tim Albring, and the SU2 contributors.
+ *
+ * SU2 is free software; you can redistribute it and/or
+ * modify it under the terms of the GNU Lesser General Public
+ * License as published by the Free Software Foundation; either
+ * version 2.1 of the License, or (at your option) any later version.
+ *
+ * SU2 is distributed in the hope that it will be useful,
+ * but WITHOUT ANY WARRANTY; without even the implied warranty of
+ * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU
+ * Lesser General Public License for more details.
+ *
+ * You should have received a copy of the GNU Lesser General Public
+ * License along with SU2. If not, see <http://www.gnu.org/licenses/>.
+ */
+
+/*!
+ * \mainpage SU2 version 6.2.0 "Falcon"
+ * SU2 suite is an open-source collection of C++ based software tools
+ * to perform PDE analysis and PDE constrained optimization problems.  The toolset is designed with
+ * computational fluid dynamics and aerodynamic shape optimization in mind, but is extensible to
+ * include other families of governing equations such as potential flow, electrodynamics, chemically reacting
+ * flows, and many others.  SU2 is released under an
+ * open-source license.
+ *
+ * The following technical documentation describes the structure and details of the source code for developers.
+ */
+
+/*!
+ * \defgroup Config Descriptions of Configuration Options.
+ * \brief Group of variables that can be set using the configuration file.
+ */
+
+/*!
+ * \defgroup ConvDiscr Discretization of the convective terms.
+ * \brief Group of classes which define the numerical methods for
+ *      discretizing the convective terms of a Partial Differential Equation.
+ *      There are methods for solving the direct, adjoint and linearized
+ *      systems of equations.
+ */
+
+/*!
+ * \defgroup ViscDiscr Discretization of the viscous terms.
+ * \brief Group of classes which define the numerical methods for
+ *      discretizing the viscous terms of a Partial Differential Equation.
+ *      There are methods for solving the direct, adjoint and linearized
+ *      systems of equations.
+ */
+
+/*!
+ * \defgroup SourceDiscr Discretization of the source terms.
+ * \brief Group of classes which define the numerical methods for
+ *      discretizing the source terms of a Partial Differential Equation.
+ *      There are methods for solving the direct, adjoint and linearized
+ *      systems of equations.
+ */
+
+/*!
+ * \defgroup Potential_Flow_Equation Solving the potential flow equation.
+ * \brief Group of classes which define the system of Potential flow equation in
+ *      three formulations: direct, adjoint, and linearized.
+ */
+
+/*!
+ * \defgroup Euler_Equations Solving the Euler's equations.
+ * \brief Group of classes which define the system of Euler equations in
+ *      three formulations: direct, adjoint, and linearized.
+ */
+
+/*!
+ * \defgroup Navier_Stokes_Equations Solving the Navier-Stokes' equations.
+ * \brief Group of classes which define the system of Navier-Stokes equations in
+ *      three formulations: direct, adjoint, and linearized.
+ */
+
+/*!
+ * \defgroup Turbulence_Model Solving the turbulence models.
+ * \brief Group of classes which define the turbulence model in
+ *      three formulations: direct, adjoint, and linearized.
+ */

Common/include/CBoxMeshReaderFVM.hpp

@@ -46,51 +46,51 @@
  * \author: T. Economon
  */
 class CBoxMeshReaderFVM: public CMeshReaderFVM {
-  
+
 private:
-  
+
   unsigned long nNode; /*!< \brief Number of grid nodes in the x-direction. */
   unsigned long mNode; /*!< \brief Number of grid nodes in the y-direction. */
   unsigned long pNode; /*!< \brief Number of grid nodes in the z-direction. */
-  
+
   su2double Lx; /*!< \brief Length of the domain in the x-direction. */
   su2double Ly; /*!< \brief Length of the domain in the y-direction. */
   su2double Lz; /*!< \brief Length of the domain in the z-direction. */
-  
+
   su2double Ox; /*!< \brief Offset of the domain from 0.0 in the x-direction. */
   su2double Oy; /*!< \brief Offset of the domain from 0.0 in the y-direction. */
   su2double Oz; /*!< \brief Offset of the domain from 0.0 in the z-direction. */
-  
+
   unsigned short KindElem;  /*!< \brief VTK identifier of the interior elements. */
   unsigned short KindBound; /*!< \brief VTK identifier of the surface elements. */
-  
+
   /*!
    * \brief Computes and stores the grid points based on an analytic definition of a box grid.
    */
   void ComputeBoxPointCoordinates();
-  
+
   /*!
    * \brief Computes and stores the volume element connectivity based on an analytic definition of a box grid.
    */
   void ComputeBoxVolumeConnectivity();
-  
+
   /*!
    * \brief Computes and stores the surface element connectivity based on an analytic definition of a box grid.
    */
   void ComputeBoxSurfaceConnectivity();
-  
+
 public:
-  
+
   /*!
    * \brief Constructor of the CBoxMeshReaderFVM class.
    */
   CBoxMeshReaderFVM(CConfig        *val_config,
                     unsigned short val_iZone,
                     unsigned short val_nZone);
-  
+
   /*!
    * \brief Destructor of the CBoxMeshReaderFVM class.
    */
   ~CBoxMeshReaderFVM(void);
-  
+
 };

Common/include/CCGNSMeshReaderFVM.hpp

@@ -50,71 +50,71 @@
  * \author: T. Economon
  */
 class CCGNSMeshReaderFVM: public CMeshReaderFVM {
-  
+
 private:
-  
+
 #ifdef HAVE_CGNS
   int cgnsFileID; /*!< \brief CGNS file identifier. */
   int cgnsBase;   /*!< \brief CGNS database index. */
   int cgnsZone;   /*!< \brief CGNS zone index. */
-  
+
   int nZones;     /*!< \brief Total number of zones in the CGNS file. */
   int nSections;  /*!< \brief Total number of sections in the CGNS file. */
-  
+
   vector<bool> isInterior;             /*!< \brief Vector of booleans to store whether each section in the CGNS file is an interior or boundary section. */
   vector<unsigned long> nElems;        /*!< \brief Vector containing the local number of elements found within each CGNS section. */
   vector<unsigned long> elemOffset;    /*!< \brief Global ID offset for each interior section (i.e., the total number of global elements that came before it). */
   vector<vector<cgsize_t> > connElems; /*!< \brief Vector containing the local element connectivity found within each CGNS section. First index is the section, second contains the connectivity in format [globalID VTK n1 n2 n3 n4 n5 n6 n7 n8] for each element. */
   vector<vector<char> > sectionNames;  /*!< \brief Vector for storing the names of each boundary section (marker). */
-  
+
   /*!
    * \brief Open the CGNS file and checks for errors.
    * \param[in] val_filename - string name of the CGNS file to be read.
    */
   void OpenCGNSFile(string val_filename);
-  
+
   /*!
    * \brief Reads all CGNS database metadata and checks for errors.
    */
   void ReadCGNSDatabaseMetadata();
-  
+
   /*!
    * \brief Reads all CGNS zone metadata and checks for errors.
    */
   void ReadCGNSZoneMetadata();
-  
+
   /*!
    * \brief Reads the grid points from a CGNS zone into linear partitions across all ranks.
    */
   void ReadCGNSPointCoordinates();
-  
+
   /*!
    * \brief Reads the metadata for each CGNS section in a zone and collect information, including the size and whether it is an interior or boundary section.
    */
   void ReadCGNSSectionMetadata();
-  
+
   /*!
    * \brief Reads the interior volume elements from one section of a CGNS zone into linear partitions across all ranks.
    * \param[in] val_section - CGNS section index.
    */
   void ReadCGNSVolumeSection(int val_section);
-  
+
   /*!
    * \brief Reads the surface (boundary) elements from the CGNS zone. Only the master rank currently reads and stores the connectivity, which is linearly partitioned later.
    * \param[in] val_section - CGNS section index.
    */
   void ReadCGNSSurfaceSection(int val_section);
-  
+
   /*!
    * \brief Reformats the CGNS volume connectivity from file into the standard base class data structures.
    */
   void ReformatCGNSVolumeConnectivity();
-  
+
   /*!
    * \brief Reformats the CGNS volume connectivity from file into the standard base class data structures.
    */
   void ReformatCGNSSurfaceConnectivity();
-  
+
   /*!
    * \brief Get the VTK type and string name for a CGNS element type.
    * \param[in] val_elem_type - CGNS element type.
@@ -124,7 +124,7 @@ class CCGNSMeshReaderFVM: public CMeshReaderFVM {
   string GetCGNSElementType(ElementType_t val_elem_type,
                             int           &val_vtk_type);
 #endif
-  
+
   /*!
    * \brief Routine to launch non-blocking sends and recvs amongst all processors.
    * \param[in] bufSend - Buffer of data to be sent.
@@ -143,7 +143,7 @@ class CCGNSMeshReaderFVM: public CMeshReaderFVM {
                         SU2_MPI::Request *recvReq,
                         unsigned short countPerElem,
                         unsigned short commType);
-  
+
   /*!
    * \brief Routine to complete the set of non-blocking communications launched with InitiateComms() with MPI_Waitany().
    * \param[in] nSends - Number of sends to be completed.
@@ -155,20 +155,20 @@ class CCGNSMeshReaderFVM: public CMeshReaderFVM {
                         SU2_MPI::Request *sendReq,
                         int nRecvs,
                         SU2_MPI::Request *recvReq);
-  
-  
+
+
 public:
-  
+
   /*!
    * \brief Constructor of the CCGNSMeshReaderFVM class.
    */
   CCGNSMeshReaderFVM(CConfig        *val_config,
                      unsigned short val_iZone,
                      unsigned short val_nZone);
-  
+
   /*!
    * \brief Destructor of the CCGNSMeshReaderFVM class.
    */
   ~CCGNSMeshReaderFVM(void);
-  
+
 };