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MRG: rework the manifest documentation; do misc cleanup #3027

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merged 39 commits into from
Mar 20, 2024
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7ee0052
rework the manifest documentation
ctb Feb 22, 2024
5f6ef82
load manifest paths relative to cwd
ctb Mar 1, 2024
2405e9d
[pre-commit.ci] auto fixes from pre-commit.com hooks
pre-commit-ci[bot] Mar 1, 2024
df87087
more better tests
ctb Mar 1, 2024
d7da0aa
[pre-commit.ci] auto fixes from pre-commit.com hooks
pre-commit-ci[bot] Mar 1, 2024
0caee7f
implement --abspath, --relpath for sig check
ctb Mar 2, 2024
1fba4ee
clean up relpath a bit
ctb Mar 2, 2024
f3079b9
add --relpath to sig collect
ctb Mar 2, 2024
b17cd4f
implement --relpath for sig collect too
ctb Mar 3, 2024
72a9062
[pre-commit.ci] auto fixes from pre-commit.com hooks
pre-commit-ci[bot] Mar 3, 2024
5cf4749
straighten out tests
ctb Mar 3, 2024
d6dfe35
add abspath/relpath to sig collect tests
ctb Mar 3, 2024
da3f165
[pre-commit.ci] auto fixes from pre-commit.com hooks
pre-commit-ci[bot] Mar 3, 2024
b185be9
add abspath/relpath tests for sig collect
ctb Mar 3, 2024
9d2018c
Merge branch 'manifest_relpath' of https://github.com/sourmash-bio/so…
ctb Mar 3, 2024
28e0a5b
[pre-commit.ci] auto fixes from pre-commit.com hooks
pre-commit-ci[bot] Mar 3, 2024
e9b9a34
fix/update comments
ctb Mar 3, 2024
f88c662
update docs for sig check and sig collect
ctb Mar 3, 2024
4e10802
add in some documentation about relpath in sourmash internals
ctb Mar 3, 2024
6dd3e3a
path rewriting tests for sig check
ctb Mar 3, 2024
e3bb509
update docs
ctb Mar 3, 2024
703585c
add --relpath tests for sig collect
ctb Mar 3, 2024
346ed82
[pre-commit.ci] auto fixes from pre-commit.com hooks
pre-commit-ci[bot] Mar 3, 2024
637b1fc
a few more tests
ctb Mar 3, 2024
8b1bc2c
[pre-commit.ci] auto fixes from pre-commit.com hooks
pre-commit-ci[bot] Mar 3, 2024
5937cb0
Merge branch 'manifest_relpath' into update_sig_collect
ctb Mar 3, 2024
c9bf80e
more documentation foo
ctb Mar 4, 2024
5d9f219
more docs
ctb Mar 4, 2024
a13b77e
Merge branch 'latest' of https://github.com/sourmash-bio/sourmash int…
ctb Mar 8, 2024
cbc7fbc
Merge branch 'latest' of https://github.com/sourmash-bio/sourmash int…
ctb Mar 9, 2024
bad1a71
Merge branch 'latest' of https://github.com/sourmash-bio/sourmash int…
ctb Mar 10, 2024
104042a
Merge branch 'latest' of https://github.com/sourmash-bio/sourmash int…
ctb Mar 12, 2024
3741203
more updates
ctb Mar 17, 2024
eba2541
more
ctb Mar 17, 2024
c42fd00
Merge branch 'latest' of github.com:sourmash-bio/sourmash into update…
ctb Mar 17, 2024
0d9ec6d
Merge branch 'latest' of github.com:sourmash-bio/sourmash into update…
ctb Mar 19, 2024
c34421d
misc fixes
ctb Mar 19, 2024
cb6bae3
Update doc/command-line.md
ctb Mar 20, 2024
8711c3d
Merge branch 'latest' into update_sig_collect
ctb Mar 20, 2024
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Merge branch 'latest' into update_sig_collect
  • Loading branch information
ctb authored Mar 20, 2024
commit 8711c3d1780c2469748a8d2688b2bda572b700f4

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