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fix path
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sjanssen2 committed Nov 25, 2024
1 parent 1e075ea commit 604a3c6
Showing 1 changed file with 1 addition and 1 deletion.
2 changes: 1 addition & 1 deletion .github/workflows/sepp_tests.yml
Original file line number Diff line number Diff line change
Expand Up @@ -63,7 +63,7 @@ jobs:
rm -v `find ~/ -type f -name pplacer`
wget "https://github.com/matsen/pplacer/releases/download/v1.1.alpha17/pplacer-Linux-v1.1.alpha17.zip"
unzip pplacer-Linux-v1.1.alpha17.zip
mv -v pplacer-Linux-v1.1.alpha17/pplacer ../sepp/.sepp/bundled-v4.5.5/pplacer
mv -v pplacer-Linux-v1.1.alpha17/pplacer ../.sepp/bundled-v4.5.5/pplacer
rm -rf pplacer-Linux-v1.1.alpha17*
../sepp-package/run-sepp.sh ../test/unittest/data/q2-fragment-insertion/input_fragments.fasta funcTest -x 2 -a ../test/unittest/data/q2-fragment-insertion/reference_alignment_tiny.fasta -t ../test/unittest/data/q2-fragment-insertion/reference_phylogeny_tiny.nwk -r ../test/unittest/data/q2-fragment-insertion/RAxML_info-reference-gg-raxml-bl.info -b 1
diff funcTest_placement.tog.relabelled.tre ../test/functionaltest/funcTest_q2-tiny_placement.tog.relabelled.tre
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