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Add countries to epiv1 datapivot export #1107

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merged 3 commits into from
Sep 24, 2024
Merged

Add countries to epiv1 datapivot export #1107

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9a546e0
add countries to datapivot export
caseyhans Sep 20, 2024
1be4849
update epi fixture
caseyhans Sep 20, 2024
7ea5f18
Merge branch 'main' into epi-datapivot-countries
caseyhans Sep 20, 2024
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5 changes: 4 additions & 1 deletion hawc/apps/epi/exports.py
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Original file line number Diff line number Diff line change
Expand Up @@ -368,7 +368,9 @@ def build_modules(self) -> list[ModelExport]:
include=("id", "short_citation", "study_identifier", "published"),
),
StudyPopulationExport(
"sp", "study_population", include=("id", "name", "age_profile", "source", "design")
"sp",
"study_population",
include=("id", "name", "age_profile", "source", "design", "countries"),
),
OutcomeExport(
"outcome",
Expand Down Expand Up @@ -593,6 +595,7 @@ def build_df(self) -> pd.DataFrame:
"sp-age_profile": "study population age profile",
"sp-source": "study population source",
"sp-design": "design",
"sp-countries": "countries",
"outcome-id": "outcome id",
"outcome-name": "outcome name",
"outcome-system": "outcome system",
Expand Down
3 changes: 3 additions & 0 deletions tests/data/api/api-dp-data-epi.json
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Expand Up @@ -10,6 +10,7 @@
"age of outcome measurement": "",
"comparison set id": 1,
"comparison set name": "Tokyo subway victims (different groups)",
"countries": "Japan",
"design": "Case series",
"diagnostic": "other",
"dose response": "not-applicable",
Expand Down Expand Up @@ -85,6 +86,7 @@
"age of outcome measurement": "",
"comparison set id": 1,
"comparison set name": "Tokyo subway victims (different groups)",
"countries": "Japan",
"design": "Case series",
"diagnostic": "other",
"dose response": "not-applicable",
Expand Down Expand Up @@ -160,6 +162,7 @@
"age of outcome measurement": "",
"comparison set id": 1,
"comparison set name": "Tokyo subway victims (different groups)",
"countries": "Japan",
"design": "Case series",
"diagnostic": "other",
"dose response": "not-applicable",
Expand Down