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Opening this as an issue after @nbahlis commented on #510
Hello, when using RenameCells I get the error "invalid dimnames given for "dgCMatrix" object " Does RenameCells work with sparse matrices?
thanks
The text was updated successfully, but these errors were encountered:
Hi @nbahlis
Are you able to provide a reproducible example that causes the error?
I tried the following code using a sparse matrix and didn't have any problems.
library(Seurat) data("pbmc_small") sparse_data <- as(pbmc_small@raw.data, "dgCMatrix") pbmc_sparse <- CreateSeuratObject(sparse_data) RenameCells(pbmc_sparse, add.cell.id = "TEST")
The Seurat developers might have more of an idea what the problem could be here.
Sorry, something went wrong.
thank you Luke, Mia Culpa. There was an error in my matrix. Code is fine
Merge pull request #523 from satijalab/doc/annotateanchors
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Add spatial section in website docs, add concept tags
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Opening this as an issue after @nbahlis commented on #510
Hello,
when using RenameCells I get the error "invalid dimnames given for "dgCMatrix" object "
Does RenameCells work with sparse matrices?
thanks
The text was updated successfully, but these errors were encountered: