Skip to content

Commit

Permalink
Update README.md
Browse files Browse the repository at this point in the history
  • Loading branch information
arq5x authored Mar 24, 2022
1 parent 695367c commit d9f2e4c
Showing 1 changed file with 14 additions and 10 deletions.
24 changes: 14 additions & 10 deletions README.md
Original file line number Diff line number Diff line change
Expand Up @@ -97,29 +97,33 @@ All assignments are due on the date stated in class. Ten percent of the grade wi
- Mar 17, 2022: SNP and INDEL discovery (part 1)
- [slides](https://docs.google.com/presentation/d/1D4XY9XxQiyYcwwhomRRONxCPr_bJvcC0WM4sb8vouZM/edit?usp=sharing)
- [youtube](https://www.youtube.com/watch?v=2ro9WCOpQqI)
- Mar 11, 2020: SNP and INDEL discovery (part 2)
- [slides](https://docs.google.com/presentation/d/12jeJQPbntPPPGYszIH1l9u83mXFVU1XdJw-bNgbFu28/edit?usp=sharing)
- [youtube](https://www.youtube.com/watch?v=FY9t3sQMlJw)
- Mar 16, 2020: VCF format, Hardy Weinberg Equilibrium, VCF toolkits
- Mar 22, 2022: Rates and patterns of human germline variation
- [slides]()
- [youtube]()
- Mar 24, 2022: VCF format, Hardy Weinberg Equilibrium, VCF toolkits
- [slides](https://docs.google.com/presentation/d/1kt2br-ZcDIzRqx__oTdC8i4NlAhluWX2WsPT_clqMaI/edit?usp=sharing)
- [youtube](https://www.youtube.com/watch?v=FZtWnNghRkA)
- Mar 18, 2020: VCF annotation and interpetation
- Mar 29, 2022: VCF annotation and interpetation
- [slides](https://docs.google.com/presentation/d/1DN99IgciDD05b5Ve_Eaym0ORPhuDFAPU1fXBPoOq5Vo/edit?usp=sharing)
- [youtube](https://www.youtube.com/watch?v=M8UfW8RNTKI)
- Mar 23, 2020: Genome Annotation and Resources
- Mar 31, 2022: Genome Annotation and Resources
- [slides](https://docs.google.com/presentation/d/1PU4ADdlmZu9jOkUa_FgrS5ppTJ3CsCIXwn1W9WkzApI/edit?usp=sharing)
- [youtube](https://www.youtube.com/watch?v=ElnZGlzb4qo)
- Mar 25, 2020: Genome Annotation Formats.
- April 5, 2022: Genome Annotation Formats.
- [slides - 1](https://docs.google.com/presentation/d/1Eylp9pcU8xEhyBJJvL57pSjSukQdhBnG1sWCvJlCngs/edit?usp=sharing)
- [slides - 2](https://docs.google.com/presentation/d/1yXFB72CHPiVH8zCKBwBOQg-ssmzS9xUOcTNhcsQgV1c/edit?usp=sharing)
- [youtube](https://www.youtube.com/watch?v=tq3GeDXbZXA)
- Homework #6: https://gist.github.com/arq5x/c0eb84bce2086fbfbe9184668ef87b31#file-hw6-md
<!-- - Homework #6: https://gist.github.com/arq5x/c0eb84bce2086fbfbe9184668ef87b31#file-hw6-md
- due April 6 at 11:59PM
- post answers as `UNID.hw6.txt` to this [link](https://uofu.app.box.com/f/462f5bfaaeb14f8ebb2b3c25f0cfab59)
- Mar 30, 2020: Genome arithmetic with bedtools
- post answers as `UNID.hw6.txt` to this [link](https://uofu.app.box.com/f/462f5bfaaeb14f8ebb2b3c25f0cfab59) -->
- April 7, 2022: Genome arithmetic with bedtools
- [bedtools tutorial](http://quinlanlab.org/tutorials/bedtools/bedtools.html)
- [bedtools docs](https://bedtools.readthedocs.io/en/latest/index.html#)
- [youtube](https://www.youtube.com/watch?v=1R1KocKEzYY)



TBD
- Apr 1, 2020: Real world analyses with bedtools.
- [slides](https://docs.google.com/presentation/d/1-LR5tHGbvJtmk5rdyBihzd_9viI15KnTtFOrmAHdjsc/edit?usp=sharing)
- [youtube](https://www.youtube.com/watch?v=qV6Iv1Dco-M)
Expand Down

0 comments on commit d9f2e4c

Please sign in to comment.