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$ qiime tools import --type 'SampleData[PairedEndSequencesWithQuality]' \
--input-path fq-manifest.tsv \
--output-path demux.qza \
--input-format PairedEndFastqManifestPhred33V2
/Users/gregcaporaso/miniconda3/envs/qiime2-2022.11/lib/python3.8/site-packages/q2_types/per_sample_sequences/_format.py:56: FutureWarning: iteritems is deprecated and will be removed in a future version. Use .items instead.
fori, (id_, fp)inenumerate(column.iteritems(), start=1):
Imported fq-manifest.tsv as PairedEndFastqManifestPhred33V2 to demux.qza
Note this is just a warning - the file was generated just fine.
The text was updated successfully, but these errors were encountered:
gregcaporaso
changed the title
deprecation warning on import of in type SampleData[PairedEndSequencesWithQuality] with format PairedEndFastqManifestPhred33V2
deprecation warning on import of type SampleData[PairedEndSequencesWithQuality] with format PairedEndFastqManifestPhred33V2Jan 23, 2023
I got the following this morning with 2022.11:
Note this is just a warning - the file was generated just fine.
The text was updated successfully, but these errors were encountered: