test v0.1.9

fix bugs related to GENCODE annotation
pirl-unc · Feb 15, 2024 · 4ce03af · 4ce03af
1 parent 9c41e6c
commit 4ce03af
Showing 1 changed file with 0 additions and 2 deletions.
diff --git a/python/vstolib/gencode.py b/python/vstolib/gencode.py
@@ -203,8 +203,6 @@ def __read_gtf_file_transcripts(self):
                         continue
                     if len(self.levels) > 0 and curr_transcript_level not in self.levels:
                         continue
-                    if len(self.levels) > 0 and curr_transcript_support_level not in self.levels:
-                        continue
                     data['gene_id'].append(curr_gene_id)
                     data['transcript_id'].append(curr_transcript_id)
                     data['transcript_id_stable'].append(curr_transcript_stable_id)