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Avoid using PyRun_File at all because windows seems to have known issue #9655

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Run time

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Job	Run time
CodeFormatting	12s
centos-test/batch	21m 44s
ClangTidy	0s
ubuntu-test/batch	9m 58s
macos-clang	18m 46s
ubuntu-test/unittest-d	6m 53s
macos-gcc	11m 41s
ubuntu-test/gui	8m 34s
centos-test/gui	23m 6s
msys2-gcc	45m 30s
windows-msvc	31m 25s
ubuntu-regression	6m 34s
ubuntu-coverage	8m 31s
ubuntu-install	6m 32s
ubuntu-valgrind	10m 4s
	3h 29m 30s