Repositories list

• deep-dive-expression

  Public
  Analyzing gene expression and gene/ncRNA coexpression in three species of stony coral. This work builds on completed summary of the ncRNA landscape of these species (deep-dive).

  HTML

  •0•1•20•0•Updated Feb 9, 2025Feb 9, 2025

• timeseries_molecular

  Public
  HTML

  •0•0•5•0•Updated Feb 8, 2025Feb 8, 2025

• apulchra_metabolism

  Public
  E5 project to investigate the effect of altered adult coral metabolism on epigenetic state and stress response

  HTML

  •0•0•0•0•Updated Feb 4, 2025Feb 4, 2025

• timeseries

  Public
  Data generated from e5 time series sampling in Moorea

  R

  •0•3•8•0•Updated Dec 9, 2024Dec 9, 2024

• deep-dive

  Public
  HTML

  •0•0•10•0•Updated Nov 27, 2024Nov 27, 2024

• mechanism_to_model

  Public
  HTML

  •0•0•1•0•Updated Oct 23, 2024Oct 23, 2024

• protocols

  Public
  Be sure to check out wiki for open science best practices

  4•8•0•0•Updated Feb 6, 2023Feb 6, 2023

• urol-e5.github.io

  Public
  Ruby

  •0•2•0•0•Updated Nov 27, 2022Nov 27, 2022

• DEB-parameterization

  Public
  Linking empirical data to DEB parameters

  0•0•0•0•Updated May 13, 2020May 13, 2020

• molecular-prelim

  Public
  Exploring test data sets to see how to best determine states

  Jupyter Notebook

  •0•0•2•0•Updated May 6, 2020May 6, 2020