Repositories list

• NetIso

  Public
  Integrative Gene and Isoform Co-expression Networks Reveal Regulatory Rewiring in Stress-related Psychiatric Disorders

  Jupyter Notebook

  •0•0•0•0•Updated Feb 4, 2025Feb 4, 2025

• ImmuneDepressionSymptoms

  Public
  R

  •0•1•0•0•Updated Jul 18, 2024Jul 18, 2024

• longmixr

  Public
  R

  •

  GNU General Public License v2.0

  •1•3•0•0•Updated Feb 6, 2024Feb 6, 2024

• dex-stim-human-dna-methyl-qc

  Public
  Dexamethasone-stimulated DNAm QC

  R

  •0•0•0•0•Updated Mar 1, 2023Mar 1, 2023

• embed_multimodalNet

  Public
  R

  •1•0•0•0•Updated Feb 28, 2023Feb 28, 2023

• kimono

  Public
  KiMONo is a network inference tool for multi-omics datasets. The multi-omics network is calculated by sparse-group-LASSO regression and can incorporate prior biological information using protein-protein Interactions.

  network-inferencedata-integrationmulti-omic

  R

  •3•9•0•0•Updated Nov 21, 2022Nov 21, 2022

• auger

  Public
  R

  •0•0•0•0•Updated Jun 24, 2020Jun 24, 2020

• DeepWAS

  Public
  DeepWAS: Directly integrating regulatory information into GWAS using machine learning

  Jupyter Notebook

  •5•16•1•0•Updated Mar 14, 2019Mar 14, 2019

• misina

  Public
  Misina: Finding microRNA-mediated effects of genetic variants with an integrative approach

  R

  •0•2•0•0•Updated Jun 25, 2018Jun 25, 2018

• test_review

  Public archive
  1•0•0•0•Updated Mar 29, 2018Mar 29, 2018