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Fix Leftover ADIOS1 Mentions #1683

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merged 2 commits into from
Oct 30, 2024
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@ax3l ax3l commented Oct 10, 2024

Leaves the doc page on ADIOS1 for now in, because it contains a migration guide on how to read legacy BP3 files.

Note: Examples 7 and 13 still mention adios1 options, which will need a separate PR to update.

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Note: Examples 7 and 13 still mention adios1 options, which will need a separate PR to update.

I pushed a commit that does this, I think this PR is fine for it

@franzpoeschel franzpoeschel enabled auto-merge (squash) October 29, 2024 10:16
ax3l and others added 2 commits October 30, 2024 15:32
Signed-off-by: Axel Huebl <axel.huebl@plasma.ninja>
@franzpoeschel franzpoeschel merged commit de67eff into openPMD:dev Oct 30, 2024
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franzpoeschel added a commit to ax3l/openPMD-api that referenced this pull request Dec 20, 2024
* Fix Leftover ADIOS1 Mentions

Signed-off-by: Axel Huebl <axel.huebl@plasma.ninja>

* Remove ADIOS1 from examples

---------

Signed-off-by: Axel Huebl <axel.huebl@plasma.ninja>
Co-authored-by: Franz Pöschel <franz.poeschel@gmail.com>
@ax3l ax3l deleted the fix-adios1-mentions branch January 3, 2025 00:15
ax3l added a commit that referenced this pull request Jan 16, 2025
* Release: 0.16.1

Signed-off-by: Axel Huebl <axel.huebl@plasma.ninja>

* Fix new_version.py

* Update version in windows.yml

* Reformat with yapf3

* Fix greedy Regex parsing

* Changelog: Add PRs #1681 #1679 #1678

* Fix: CMake Internal Control (#1678)

The `openPMD_USE_INTERNAL_*` options are for general internal/external
control. They were accidentally overwritten by new tar flags
and sometimes incomplete.

Signed-off-by: Axel Huebl <axel.huebl@plasma.ninja>

* Revert "CMake Tar: TOML11 3.7.1 (#1673)" (#1679)

This reverts commit aea4b72.

* Replace deprecated makeSuite with loadTestsFromTestCase (#1681)

Removed with Python 3.13

* Doc: Fix Shipped Internally (#1682)

Downloaded now.

Signed-off-by: Axel Huebl <axel.huebl@plasma.ninja>

* `PYBIND11_FINDPYTHON=ON` (#1684)

Reuse our `find_package(Python ...)` call and use new CMake logic in
pybind11.
https://pybind11.readthedocs.io/en/stable/compiling.html#modules-with-cmake
https://cmake.org/cmake/help/latest/command/find_package.html#config-mode-version-selection

Signed-off-by: Axel Huebl <axel.huebl@plasma.ninja>

* Fix ICX build (#1690)

Error was:
 /home/runner/work/openPMD-api/openPMD-api/include/openPMD/backend/Container.hpp:262:32:
error: no member named 'm_container' in 'Container<T, T_key,
T_container>'
  262 |         container().swap(other.m_container);

* Fix Leftover ADIOS1 Mentions (#1683)

* Fix Leftover ADIOS1 Mentions

Signed-off-by: Axel Huebl <axel.huebl@plasma.ninja>

* Remove ADIOS1 from examples

---------

Signed-off-by: Axel Huebl <axel.huebl@plasma.ninja>
Co-authored-by: Franz Pöschel <franz.poeschel@gmail.com>

* Explicitly specify ADIOS2 components in openPMDConfig.cmake (#1693)

* Explicitly specify ADIOS2 components in openPMDConfig.cmake

When including openPMD in downstream CMake and that CMake script
contains Fortran, ADIOS2 will automatically detect that. But since we
do not reexport the ADIOS2 headers, we only need the components that
openPMD explicitly uses: CXX and MPI.

* Same in CMakeLists.txt

* Remove mpirun_workaround.sh (#1698)

Seems to no longer be necessary in the affected CI runs

* Properly check for empty HDF5_VERSION in CMake (#1702)

The old test apparently invoked some weird CMake legacy behavior.
This should make the pinned HDF5 Conda version unnecessary (#1701) since
the version with missing HDF5_VERSION is correctly dealt with.

* HDF5: Delete and re-create attribute when overwriting with diff. type (#1697)

* HDF5: Delete and re-create attribute when overwriting with diff. type

* WIP: Change datatype in test

Somehow truncation test is broken by this

* Add forgotten H5Aclose() call

* TOUCH IOTask: Avoid setting files as dirty in non-write modes (#1704)

* Bugfix: Consider dirty upon touch() only in write modes

* Add error check to avoid writing in read-only mode

* Changelog

* Use ULONG for particle patches

* Upgrade appleclang14 build to MacOS 13

> The macOS-12 environment is deprecated, consider switching to macOS-13,
macOS-14 (macos-latest) or macOS-15. For more details, see
actions/runner-images#10721

* Update Changelog

* Release Date

---------

Signed-off-by: Axel Huebl <axel.huebl@plasma.ninja>
Co-authored-by: Franz Pöschel <franz.poeschel@gmail.com>
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