Apply suggestions from code review

Co-authored-by: Mathias Goncalves <mathiasg@stanford.edu>
nipreps · Sep 8, 2022 · cbad583 · cbad583
1 parent 062355a
commit cbad583
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Showing 4 changed files with 4 additions and 4 deletions.
diff --git a/sdcflows/interfaces/epi.py b/sdcflows/interfaces/epi.py
@@ -88,7 +88,7 @@ class _SortPEBlipsInputSpec(BaseInterfaceInputSpec):
 
 class _SortPEBlipsOutputSpec(TraitedSpec):
     out_data = OutputMultiObject(
-        File(exists=True),
+        File(),
         desc="list of input data",
     )
     pe_dirs = InputMultiObject(

diff --git a/sdcflows/interfaces/utils.py b/sdcflows/interfaces/utils.py
@@ -302,7 +302,7 @@ class _PositiveDirectionCosinesInputSpec(BaseInterfaceInputSpec):
 
 
 class _PositiveDirectionCosinesOutputSpec(TraitedSpec):
-    out_file = File(exists=True)
+    out_file = File()
     in_orientation = traits.Str()
 
 

diff --git a/sdcflows/workflows/fit/pepolar.py b/sdcflows/workflows/fit/pepolar.py
@@ -213,7 +213,7 @@ def init_topup_wf(
     from niworkflows.interfaces.nibabel import SplitSeries
     from ...interfaces.bspline import ApplyCoeffsField
 
-    # Separate the runs again, as our ApplyCoeffsField corrects them separatelly
+    # Separate the runs again, as our ApplyCoeffsField corrects them separately
     split_blips = pe.Node(SplitSeries(), name="split_blips")
     unwarp = pe.Node(ApplyCoeffsField(), name="unwarp")
     unwarp.interface._always_run = True

diff --git a/setup.cfg b/setup.cfg
@@ -32,7 +32,7 @@ install_requires =
     nibabel >=3.0.1
     nipype >=1.5.1,<2.0
     traits <6.4
-    niworkflows @ git+https://github.com/nipreps/niworkflows.git@master
+    niworkflows ~= 1.6.3
     nitransforms >= 21.0.0
     numpy >= 1.21.0
     pybids >= 0.15.1