Feat - submit tests

[anngvu]

• Built upon maintenance PR Patch main-ci workflow #434 -- need to merge that first.

Adds basic feature for submission testing, see #441 and #173. This takes the manifests that passes validation and tries submitting them to a Synapse mock dataset created. This appears to add ~40s to our CI for each mock manifest with 5 rows or so.

@cconrad8 More for awareness since looking at these tests may be more helpful than looking at the official schematic CLI documentation.

[github-actions]

Test Suite Report 24.4.1

Template Generation

template	result	link
AnimalIndividualTemplate	😄	template link
BiospecimenTemplate	😄	template link
ClinicalAssayTemplate	😄	template link
EpigeneticsAssayTemplate	😄	template link
FlowCytometryTemplate	😄	template link
GenomicsAssayTemplateExtended	😄	template link
GenomicsAssayTemplate	😄	template link
HumanCohortTemplate	😄	template link
ImagingAssayTemplate	😄	template link
LightScatteringAssayTemplate	😄	template link
MRIAssayTemplate	😄	template link
MethylationArrayTemplate	😄	template link
PharmacokineticsAssayTemplate	😄	template link
PlateBasedReporterAssayTemplate	😄	template link
ProcessedAlignedReadsTemplate	😄	template link
ProcessedExpressionTemplate	😄	template link
ProcessedVariantCallsTemplate	😄	template link
ProteomicsAssayTemplate	😄	template link
ProtocolTemplate	😄	template link
RNASeqTemplate	😄	template link
ScRNASeqTemplate	😄	template link
UpdateMilestoneReport	😄	template link
WESTemplate	😄	template link
WGSTemplate	😄	template link

Manifest Validation

manifest	result	expectation
GenomicsAssayTemplate_0.csv	❌	Lists can be blank if attr not required using ‘list like’ rule
GenomicsAssayTemplate_1.csv	❌	Mixing blanks and regular list values works
GenomicsAssayTemplate_2.csv	❌	Conditional validation for attributes is currently not supported
GenomicsAssayTemplate_control.csv	😄	There should be no issue with this template.
ScRNASeqTemplate_0.csv	❌	Single list val works by using ‘list like’ rule
ScRNASeqTemplate_1.csv	😄	Fail because of missing data in required field libraryStrand

Manifest Submission

manifest	pass
GenomicsAssayTemplate_control.csv	😄

[allaway]

LGTM - thank you. I had one minor readme suggestion.