Fix patch

nf-core · Aug 3, 2022 · b88a423 · b88a423
1 parent f80a5c9
commit b88a423
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Showing 2 changed files with 3 additions and 2 deletions.
diff --git a/nf_core/modules/modules_command.py b/nf_core/modules/modules_command.py
@@ -26,7 +26,6 @@ def __init__(self, dir, remote_url=None, branch=None, no_pull=False, base_path=N
         """
         self.modules_repo = ModulesRepo(remote_url, branch, no_pull, base_path)
         self.dir = dir
-        self.module_names = None
         try:
             if self.dir:
                 self.dir, self.repo_type = nf_core.modules.module_utils.get_repo_type(self.dir)

diff --git a/nf_core/modules/patch.py b/nf_core/modules/patch.py
@@ -34,7 +34,9 @@ def patch(self, module=None):
 
         if module is None:
             module = questionary.autocomplete(
-                "Tool:", self.module_names[self.modules_repo.fullname], style=nf_core.utils.nfcore_question_style
+                "Tool:",
+                self.modules_json.get_all_modules()[self.modules_repo.fullname],
+                style=nf_core.utils.nfcore_question_style,
             ).unsafe_ask()
         module_fullname = str(Path(self.modules_repo.fullname, module))